Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00757 ATGGCGTTTGATCAGAATTCCGTTCCGTTGGATCTTCGTCCGTTGAATGTAGCTGCCGCCATGGCGGAGGAGCCGATCATTTCGCCGGCCACCGTCACGCCGCCGACTCCCAATTCTGTCGGCGAGCTTTTTTACCAGCAGGCGCCCTCCGCCGCCGGCACAACGTGGTGCGTCCGCCCCATTGCGCATGCCAACGTGAGCCCTGCCGCGGCGTATGGGTTTAACTACGGCGCTTCCAGCTTTGGCAATCGCGTGGTGGCCGGGAATGCTTTGAGTTTGGGGAAGCTTGTGGGGTGTAATGGATTGGACAAGGCCTGCAATGGTGCGAGTGGTTTTGGTTATGGTGTTGGCGGGGTTCGGGACAGCAGAGTGGTCGGTAGTGGCAGCGATCACGGTGGCGGGGATGAGGGTGGCGGCGGCGGCGGCGATGATTCGGCGTCAGGGAGGAAGGTGAAGTTTCTCTGCAGTTTTGGCGGGAAGATTTTGCCTAGGCCTAGTGATGGAATGTTGAGATATGTTGGGGGCCAAACAAGGATCATTAGTGTTAGGAAGGATGTGAGTTTCAATGATTTGGTGCAGAAGATGGTTGACATTTATGGGCAGGCTGTGGTTATCAAGTACCAGCTTCCTGAGGAGGATCTTGATGCCTTGGTGTCCGTGTCGTGTCACGATGATGTTGAGAATATGATGGAAGAGTATGATAAGTTAGTTGACAGATCTCCCGACGGTTCTGCAAAACTAAGAGTTTTTCTGTTTTCTGTTTCGGATACGGAGGTTTCTAGTGGGGTGCAGTTTGGGGACTTGCAGGATACCGGACAGAAATATTTTGATGCTGTGAATGGGATTGGTATGACAGAGGGGATTGGGTTTGGTGGTGGGATCAATAGGAAGGGGAGTGTTACAAGTGCCGCTTCAACCCAGAATTCTGATTTGAGTGGGGCTGATACTTTTGATAGTTCTATTACTGGTCAAGGGGATGTCACTGGGATGCCCTTCTCATTGCCTAAAGAGAATGTGGCCGCAGCTTCTTCAGACTCAAGTGCTAATATGGTGATTTCAGAGGCCAGTGCACCGGGTGTTTGTGCAGTTTCGACGGCCATGCCTGTGGCTAGGGCTAGTCCAATCCCATCCCACAGTCCTTATTTTCAGAATGATGTTGAGTTAGAAAGGTCTGTCCCTGTTACTTTGCCCCAGCAGCCTTTTGGATTGCAGCAAGCTGGAATAGAAGTTCCAACCCCTTCACCTTATTTGCAGCCTTGTGTTGATCCTAGCAAGGAGGTTATGAACCATCCAGACTATGTCCAGGTTACTCCGCAGATGAGGTTCACAAACCCTCAGCTTTTAGGAAAGACCGGGCCTGTCTTGAGGCAACAGCAGTTTCATGATAATACTCCCGGCTTAGCATTCCATCATCCGGTCATCCCTGGGGTACAAGTGACTGTGGCTCAACAATCTTCTCTTGCTGGTGTAAGACCCAATGTTATTCAACCACAACCGTTGGTGCAACCACAGCAACATCTTTTGGATCAATACCATGATGAAAATGCATCAGGGGTAAGGATTATCCAGCTTCCTGCTGAACGTAGCTACAACGCTTACCAGGTTCCGGTGAGTCAAGTGCCACCTGTCATAGTTGGAGGCAATTATGGCTGGGTTCAGGTCCCTTCACAAGAGCGCGTTGTTATCTCTGATGGAGTACTACCTCAACAACAGGTAATGAGCCCTGAGAAATTCCGAAGAACTGATGACTGCTCTATGTGCCAGACAAAACTACCTCATGCACATTCAGATCCAGTAGTTCAGGATGAGCGTAGTAGTGGTGCAGGTTCTGTTCCTGATTCAACCCCAAATCACTATAGCTTCCCAATGGAGGACAACATAAAAGCTCAAGCACCAAATAGGATTATGCCAGTGGTGATGGCGCCGTTGAAGGAGGGCATTGCTGAACAAGGGGCTGGAACTAGACCCAGGGTCGTTGGCAAACTGGAACCTCCTGATGGAGTGCATCATACTGAGACCACTGGGCTTTCTCATAATATTGAGCCACAGACAGAAGAATTTGATCATCCCGGGAATTCATTTTTCCAGGAAAAAATTGCATTGAAAGGTAGAAAACAATCTCCAAATGATGAGCTCATGGGAACAGCACCGCTGTCTTATTTAGATGATGTTGGCGACCAACACATGGCACCAGTTGAAAACTGGGTTAAACAGGATATGCTTATTAACAAACCTATGAATAATGATATGTCTGTAGTTGATGGAACACCTGTACGAACTTCAGAGTGTATGGTTCAAGGATCTCTAAATGAATATACTCATGAACGTACCGGGGTTGTTTCTAAATCAGATGCGGTAGATAATTGGATTAGACAAGACCATCTAAAACCTATTGATGGAAGGATGGACGCCTTCAAGATACACAATTCTGATGCTTATGTAAGTAATGACCACTCTTTTCTGCCAGCCGATAAACCCAATGGGAAGGATAATTTAGGTTACAGCACTCAGAAATCTGTAGAGGAAGAGGTGATTCTGGATAACAACTTTGGCCGGTCAAAGTTGATGGCTGATGCAAATCAAAATAAGATGGCAGGTGTGCTGCCTTGTTCTTCAATGGAAATTTCATACAGGCCAAATTCCAGGGCAGGGGAATACAATGAGGCTATACAAACCCCTGTTTGGGGTATACCTGGCTCAAATCCTCAACCGAATATTGGAAACCCCCACACCGACCATTCAACACTATCTTCATCATCCCCTTCTGTCAGGTTTGGAGATGTGCAGGATACTCCGAACTCACTTTTCAGCAATCAGGATCCATGGAATATACAGCATGGTACCTTCTTTCCACCTGCTAGACCAAGCAAAGCTGCATTGAAGAAAGAAACCTATTCTTGTCAGGACCCCTTTAGTGAGGATCCTGGCAACTTCGGGGAGCAAAGTTTAGAAGCACAGTTGGATGATAGCCTCTATCAGTCATTCAAACAAAATTTAACTTTAGAACATGGTCGGACTGCCAAAGGTTCAGCAGAGGACCAACAACTCCAAGCTGTTGCGGAAAATGTAGCAGCTTCTGTTTTGCACTCAAGAACTCCTTCAAATTCTGACTTGCATTCCAGAGATGTTTCCTGTTGTGATAACATTGAGGATGGCAGTGTTCAAAATAATCTAATGGATGTAAATTGCGACAAATAG 3198 0.4737 MAFDQNSVPLDLRPLNVAAAMAEEPIISPATVTPPTPNSVGELFYQQAPSAAGTTWCVRPIAHANVSPAAAYGFNYGASSFGNRVVAGNALSLGKLVGCNGLDKACNGASGFGYGVGGVRDSRVVGSGSDHGGGDEGGGGGGDDSASGRKVKFLCSFGGKILPRPSDGMLRYVGGQTRIISVRKDVSFNDLVQKMVDIYGQAVVIKYQLPEEDLDALVSVSCHDDVENMMEEYDKLVDRSPDGSAKLRVFLFSVSDTEVSSGVQFGDLQDTGQKYFDAVNGIGMTEGIGFGGGINRKGSVTSAASTQNSDLSGADTFDSSITGQGDVTGMPFSLPKENVAAASSDSSANMVISEASAPGVCAVSTAMPVARASPIPSHSPYFQNDVELERSVPVTLPQQPFGLQQAGIEVPTPSPYLQPCVDPSKEVMNHPDYVQVTPQMRFTNPQLLGKTGPVLRQQQFHDNTPGLAFHHPVIPGVQVTVAQQSSLAGVRPNVIQPQPLVQPQQHLLDQYHDENASGVRIIQLPAERSYNAYQVPVSQVPPVIVGGNYGWVQVPSQERVVISDGVLPQQQVMSPEKFRRTDDCSMCQTKLPHAHSDPVVQDERSSGAGSVPDSTPNHYSFPMEDNIKAQAPNRIMPVVMAPLKEGIAEQGAGTRPRVVGKLEPPDGVHHTETTGLSHNIEPQTEEFDHPGNSFFQEKIALKGRKQSPNDELMGTAPLSYLDDVGDQHMAPVENWVKQDMLINKPMNNDMSVVDGTPVRTSECMVQGSLNEYTHERTGVVSKSDAVDNWIRQDHLKPIDGRMDAFKIHNSDAYVSNDHSFLPADKPNGKDNLGYSTQKSVEEEVILDNNFGRSKLMADANQNKMAGVLPCSSMEISYRPNSRAGEYNEAIQTPVWGIPGSNPQPNIGNPHTDHSTLSSSSPSVRFGDVQDTPNSLFSNQDPWNIQHGTFFPPARPSKAALKKETYSCQDPFSEDPGNFGEQSLEAQLDDSLYQSFKQNLTLEHGRTAKGSAEDQQLQAVAENVAASVLHSRTPSNSDLHSRDVSCCDNIEDGSVQNNLMDVNCDK* 1066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00757 1065 Gene3D - 171 254 - -
Lapu3g00757 1065 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 170 254 - -
Lapu3g00757 1065 PANTHER OS05G0427100 PROTEIN-RELATED 146 473 - -
Lapu3g00757 1065 SUPERFAMILY CAD & PB1 domains 166 259 - -
Lapu3g00757 1065 MobiDBLite consensus disorder prediction 900 922 - -
Lapu3g00757 1065 MobiDBLite consensus disorder prediction 125 145 - -
Lapu3g00757 1065 Pfam PB1 domain 170 253 IPR000270 GO:0005515
Lapu3g00757 1065 SMART PB1_new 165 254 IPR000270 GO:0005515
Lapu3g00757 1065 MobiDBLite consensus disorder prediction 592 619 - -
Lapu3g00757 1065 CDD PB1_UP2 154 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00757 Lapu-Chr3 8000793 8007847 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00757 144 635 MAP Kinase Kinase Kinase AT3G46920 38.508 6.83e-82 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00757 - - gmx:100819234 1395.95