Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00756 ATGATATTATTTTTTTTCTCCTTTCAGGATGTCAGGAGCAAGCAACTAGAAAAGACAAATTTTGGCTTTCCAGCATCAGGTTTTGGAAAATTACAGGTTATAAAGAACCGTGATCTTGAAGAACAGGCAGAACTGGGATCTGGTACATTTGGAACCGTATATCATGGAAAATGGAGGGGCACTGATGTTGCAATCAAGCGCATTACTGATAGGTGTTTCGCTGGAAAGCCTTCAGAGCAAGAGCGCATGAGAAACGACTTCTGGAACGAGGCAATCAAGCTTGCTGACTTGCACCATCCAAATGTGGTAGCTTTCTACGGCGTTGTGCTTGATGGCCCAGGGGGTTCTGTGGCAACAGTTACTGAATATATGGTTAATGGTTCTTTAAGAAATGCCTTGCAGAAGAGCGAGAGGAATCTTGACAAGCGCAAGCGACTTTTGATTGCAATGGACGTGGCCTTTGGCATGGAGTACCTACATGGAAAAAACATAGTACACTTTGACTTGAAAAGTGACAACTTGCTTGTTAATCTCCGAGATCCACACCGCCCAATATGCAAGGTTGGAGACTTGGGTCTGTCCAAAGTAAAATGTCAGACACTGATCTCAGGTGGGGTGAGAGGAACGCTGCCGTGGATGGCTCCAGAACTGCTGAACGGAAGCAGCAGCCTTGTTTCAGAGAAGGTTGACGTATTTTCATTTGGCATTGTGATGTGGGAACTCTTAACTGGAGATGAGCCATACGCTGACTTGCACTATGGTGCTATCATTGGTGGTATCGTGAGCAACACTCTGCGCCCTCCTGTTCCTGAATCTTGTGACCCAGAATGGACGTTGTTGATGGAGAAGTGCTGGTCATCAGAGCCATCAGAGAGACCAACCTTCACTGAGATTGCCAATGAATTGCGTTCTATAGCGGCCAAGATCTCTCCCAAAGGACAAAACCAACAGCTGCAACACTCTCCATTGCACACTCAACTCAACAAATAA 990 0.4576 MILFFFSFQDVRSKQLEKTNFGFPASGFGKLQVIKNRDLEEQAELGSGTFGTVYHGKWRGTDVAIKRITDRCFAGKPSEQERMRNDFWNEAIKLADLHHPNVVAFYGVVLDGPGGSVATVTEYMVNGSLRNALQKSERNLDKRKRLLIAMDVAFGMEYLHGKNIVHFDLKSDNLLVNLRDPHRPICKVGDLGLSKVKCQTLISGGVRGTLPWMAPELLNGSSSLVSEKVDVFSFGIVMWELLTGDEPYADLHYGAIIGGIVSNTLRPPVPESCDPEWTLLMEKCWSSEPSERPTFTEIANELRSIAAKISPKGQNQQLQHSPLHTQLNK* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00756 329 PIRSF ILK 28 321 - -
Lapu3g00756 329 SMART serkin_6 39 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00756 329 PRINTS Tyrosine kinase catalytic domain signature 229 251 IPR001245 GO:0004672|GO:0006468
Lapu3g00756 329 PRINTS Tyrosine kinase catalytic domain signature 158 176 IPR001245 GO:0004672|GO:0006468
Lapu3g00756 329 PRINTS Tyrosine kinase catalytic domain signature 273 295 IPR001245 GO:0004672|GO:0006468
Lapu3g00756 329 PRINTS Tyrosine kinase catalytic domain signature 121 134 IPR001245 GO:0004672|GO:0006468
Lapu3g00756 329 Gene3D Transferase(Phosphotransferase) domain 1 127 329 - -
Lapu3g00756 329 PANTHER SERINE-THREONINE PROTEIN KINASE 35 306 - -
Lapu3g00756 329 Pfam Protein tyrosine and serine/threonine kinase 40 302 IPR001245 GO:0004672|GO:0006468
Lapu3g00756 329 CDD STKc_MAP3K-like 45 302 - -
Lapu3g00756 329 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 127 318 - -
Lapu3g00756 329 ProSiteProfiles Protein kinase domain profile. 39 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00756 329 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Lapu3g00756 329 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 32 126 - -
Lapu3g00756 329 MobiDBLite consensus disorder prediction 310 329 - -
Lapu3g00756 329 ProSitePatterns Protein kinases ATP-binding region signature. 45 76 IPR017441 GO:0005524
Lapu3g00756 329 Gene3D Phosphorylase Kinase; domain 1 32 126 - -
Lapu3g00756 329 SUPERFAMILY Protein kinase-like (PK-like) 31 301 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00756 Lapu-Chr3 8000543 8007847 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00756 8 314 MAP Kinase Kinase Kinase AT3G46920 81.494 0.0 537
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Lapu3g00756 PK_Tyr_Ser-Thr 1.5e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00756 - - gmx:100819234 613.224