Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00744 ATGCCTTCACACAAGACGTTCAGGATCAAGAAGAAGCTTGCCAAGAAGATGAGGCAGAACAGGCCCATCCCTTACTGGATCCGCATGAGGACCGACAACACTATCAGGTCAGTTCTCAACAACTTCCGAAGGTTTTCAGAAATTGTTTCTTCATTTCGTATGTTCACACCCTGTCGTTGTTGTTTCCTTTGCGTGTGTGTGCTTTCAGGTATAATGCTAAGCGCAGGCACTGGCGCCGCACCAAGCTTGGGTTTTAAGGTGGATGGACGACTACTGGGTTCTAGGTTTTTTAGTGTAATCCTTAATATTGAAACATTGTAG 321 0.4548 MPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRSVLNNFRRFSEIVSSFRMFTPCRCCFLCVCVLSGIMLSAGTGAAPSLGFKVDGRLLGSRFFSVILNIETL* 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00744 106 Pfam Ribosomal L39 protein 9 37 IPR000077 GO:0003735|GO:0005840|GO:0006412
Lapu3g00744 106 Gene3D Ribosomal protein L39e 1 45 IPR023626 -
Lapu3g00744 106 FunFam 60S ribosomal protein-like L39 1 45 - -
Lapu3g00744 106 PANTHER RIBOSOMAL PROTEIN L39E 1 36 - -
Lapu3g00744 106 SUPERFAMILY Ribosomal protein L39e 3 37 IPR023626 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00744 1 36 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 86.111 1.05e-17 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00744 K02924 - gmx:100801450 79.3369