Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00734 ATGTACAGAAGAGCCCCATTACCTCGTCTTCTCCTTAATAATGTCTCTTGTATGAGAAATGCCCAGCAAGTTCTGCGTCATGTGAATGTCTCTCTTCATGATGGAGGGGCGCTTGTGCTAACAGGCGCAAATGGCTCGGGGAAGACAACTTTCCTGCGTATGTTAGCTGGATTTTCTCGTCCTTCTGCTGGCCAAATTCTTTGGAATGGCCATGACATTCAACAATCTGCAATATTTCATCAGTATAAGCTTCAGCTTAACTGGCTCTCTCTCAAGGACGCCATTAATGATAAGTTCACAGTTCTTAACAACGTACAATGGTTTGAACTTCTAGAGAACAAGGAAGGGAAGGCTATGGCTGCCGTCGAGTTGATGGGACTAGGAAGATTAGCTAATGAAAAACCAAGGATGCTTTCTATGGGTCAGCGTAAAAGACTACAACTTGCCAGGTTGCTGGCAATTGATCGCCCCATATGGTTGCTAGACGAGCCTTCAGTTGCATTAGACGAAGAAGGTGTAAAGTTACTTGAGTATATCATCGCAGAACATAGGAAACACGGAGGAATTGTGATTGTGGCAACTCATCTACCTATTGAGATAGAAGATTCCATGGTCTTGAAACTTCCACCAAGGTTTCCAAGGAGGATGACTCTTGTTGATATGCTTGATCGGGCGGATATCAGTTAA 687 0.4396 MYRRAPLPRLLLNNVSCMRNAQQVLRHVNVSLHDGGALVLTGANGSGKTTFLRMLAGFSRPSAGQILWNGHDIQQSAIFHQYKLQLNWLSLKDAINDKFTVLNNVQWFELLENKEGKAMAAVELMGLGRLANEKPRMLSMGQRKRLQLARLLAIDRPIWLLDEPSVALDEEGVKLLEYIIAEHRKHGGIVIVATHLPIEIEDSMVLKLPPRFPRRMTLVDMLDRADIS* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00734 228 Pfam ABC transporter 25 165 IPR003439 GO:0005524
Lapu3g00734 228 NCBIfam heme ABC exporter ATP-binding protein CcmA 12 208 IPR005895 GO:0017004|GO:0022857
Lapu3g00734 228 Gene3D - 7 207 IPR027417 -
Lapu3g00734 228 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 10 228 IPR003439 GO:0005524
Lapu3g00734 228 PANTHER ABC TRANSPORTER I FAMILY MEMBER 1 6 222 IPR005895 GO:0017004|GO:0022857
Lapu3g00734 228 SMART AAA_5 34 222 IPR003593 GO:0016887
Lapu3g00734 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 199 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00734 Lapu-Chr3 7770030 7774492 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00734 23 177 Calmodulin-binding Proteins AT2G36910 27.586 5.81e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00734 - - gmx:100796586 417.542