Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00717 ATGGCTGAGCGCCGCAGCCCCCAACCTCTCTCAGAGCCACACCCCAAGCCAAACGATTCCGACCAAAAACTGCACGACGCCAACCAAACGCAACGACTCACCGAATCGCCCTCCGCAGCCGAGTCGCAGCGCGACGAGTTACGGAGTTCCGACGAGCCTCGTACGGCGTCCAATTTAGAAACCCTAGGCGGTGCTGCTCCCTCTTCGGTTCAAACCCTTGCTGTGCAGCACCATCGGAGTGACGATTTGCAAGGGAGCTCTGCTACGCCGAATTCCGGTGGCAAAGCCGAAAGTAAGGAGACAGTGGCACCTCCTGAACAAGAAATTATTCAAAGAGGAGCAGCTCAGCCACTTCCAACTCAGACAAATCGGCTTCAGCTGTCTGTGTGTTCAACTCCATTGTCTGAACCACCACCAACTTCTGTTACAGAATCTCTATCAACTGTTTCTAGTCCAACTGTACCAAAACAAAAATTATCTACTCCGAAGGTTAATAATGCACGTTTACCAGAAGCAGATAAGAAAAAACCTTCTGGTGGCAAAACCTTATCTGCTGTTTCTGTTGCGAGGTCAACAGCATCTGATGGATATAATTGGCGGAAGTATGGTCAAAAGCAAGTGAAAAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGACTGTTGTGCTAAGAAGATTGAATGCTGTGATCATTCAGGTCATGTGATAGAGATTGTTTATAAAAGTGAGCACAGTCATGAACCTCCAAGGAAGACTAATTCTCTTAGGGAAAATAAGTTTCTGTCTGCCAGTGAACCTATTGTAGAAAACAGTGTTCAAGATCAGCCTGTCAGAGTTCTGAAGGATCCTGATCCATCTATTTCTTCAAAAGAATCTATACAAGAAGCACCCTGCAGCACTGATAAGAAACGGCCAAACTCATCTAGTATCAGTGGTAATGGTAAAGTTATTTTGAAAGAGGAACATGTAAACGAGCCAGAGCCTAAAAAAAGAATGAAGAAAGGTGACTTAACAGACATGGATTCTCCTGTTAAACCTGGAAAGAAGCCCAAGTTTGTCATACATGCAGCAGGGGATGTGGGGATATCTGGTGATGGTTACCGATGGCGCAAGTATGGGCAGAAAATGGTGAAGGGAAATCCGCATCCCAGGAACTACTACAGATGCACTTCTGCTGGATGTCCTGTCAGAAAGCACATTGAATCTGCCGTAGATAACTCAGATGCGGTCATTATAACATACAAGGGTGTACATGACCATGACATGCCTGTGCCCAAGAAACGACACGGGCCACCAAGTGCTCCTCTTGTAGCAGCTGCAGCACCCGCCTCCATGAACAGTTCGCAGGTGAAGAAACCCGATTCCCCACACAAGAAGAAAGTTTCTACACAATGGTCCGTGGACACGGAAGGAGAACTAACTGGGGAAGCCCTGGAGCTTGGGGGTGAGAAAGCAATGGAATCAGCTCGAACGCTACTGAGCATAGGTTTTGAAATTAAGCCTTGCTGA 1518 0.4704 MAERRSPQPLSEPHPKPNDSDQKLHDANQTQRLTESPSAAESQRDELRSSDEPRTASNLETLGGAAPSSVQTLAVQHHRSDDLQGSSATPNSGGKAESKETVAPPEQEIIQRGAAQPLPTQTNRLQLSVCSTPLSEPPPTSVTESLSTVSSPTVPKQKLSTPKVNNARLPEADKKKPSGGKTLSAVSVARSTASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDHSGHVIEIVYKSEHSHEPPRKTNSLRENKFLSASEPIVENSVQDQPVRVLKDPDPSISSKESIQEAPCSTDKKRPNSSSISGNGKVILKEEHVNEPEPKKRMKKGDLTDMDSPVKPGKKPKFVIHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVDNSDAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMNSSQVKKPDSPHKKKVSTQWSVDTEGELTGEALELGGEKAMESARTLLSIGFEIKPC* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00717 505 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 119 452 IPR044810 GO:0003700
Lapu3g00717 505 MobiDBLite consensus disorder prediction 321 351 - -
Lapu3g00717 505 MobiDBLite consensus disorder prediction 444 473 - -
Lapu3g00717 505 Pfam WRKY DNA -binding domain 195 250 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g00717 505 Pfam WRKY DNA -binding domain 368 423 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g00717 505 SUPERFAMILY WRKY DNA-binding domain 362 426 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g00717 505 Gene3D WRKY domain 352 427 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g00717 505 Gene3D WRKY domain 180 253 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g00717 505 MobiDBLite consensus disorder prediction 290 317 - -
Lapu3g00717 505 MobiDBLite consensus disorder prediction 1 186 - -
Lapu3g00717 505 ProSiteProfiles WRKY domain profile. 188 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g00717 505 SMART WRKY_cls 366 425 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g00717 505 SMART WRKY_cls 193 251 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g00717 505 MobiDBLite consensus disorder prediction 39 53 - -
Lapu3g00717 505 MobiDBLite consensus disorder prediction 54 96 - -
Lapu3g00717 505 FunFam WRKY transcription factor 355 427 - -
Lapu3g00717 505 ProSiteProfiles WRKY domain profile. 361 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g00717 505 MobiDBLite consensus disorder prediction 269 353 - -
Lapu3g00717 505 MobiDBLite consensus disorder prediction 114 164 - -
Lapu3g00717 505 SUPERFAMILY WRKY DNA-binding domain 190 252 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00717 Lapu-Chr3 7602019 7608298 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00717 118 505 WRKY Transcription Factor Family AT4G30935 55.867 3.01e-135 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g00717 WRKY 2.3e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00717 - - gmx:100127377 803.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00717 3 7602019 7608298 Lapu3g00717 3 7602019 7608298 ECH