Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00710 ATGATGGCATTCCAAAGCAAGGTCCATATCTTCTTCCTGTGCTTATTATTAATCTTTGCATTTTCTTCCGTTGTTGCTGTTGCTGTGCCAAAAGAGCAAGAACAAGATCGGATCTCAGCACTTCCCGGGCAGCCACGTGTGGCATTCTCTCAGTTCTCAGGTTATGTCAGTGTGAACGAGCAACATGGTCGAGCACTCTTCTACTGGCTCACCGAATCTCCCTCTTCCCCTCAGAATAAGCCTCTTGTTCTCTGGCTCAATGGAGGGCCTGGATGTTCATCAGTAGCATACGGGGCATCAGAGGAAATTGGGCCATTCCGTGTAAACAAAACTGGATCTTCTCTATATCTCAACAGAAATGCATGGAACAGAGAAGCAAATATTCTTTTCCTTGAATCGCCTGCTGGTGTTGGCTTCTCATACACAAATACCAGCTCTGATCTCAAAACTTCAGGGGACAAAAGAACAGCTCAGGATGCGCTGATTTTTCTAATTAGATGGTTGTCAAGGTTTCCGCAATATAAATATAGGGAGTTTTACATTGCTGGGGAGAGCTATGCAGGGCATTACGTCCCCCAGTTGGCTAAGAAAATTCATGATTATAATAAAAAGAATCCCCAAATAATTAATCTCAAAGGGTTCATTGTGGGAAATGCTGTGACTGATAGCTACAATGATGGGATTGGAACTGTCACATATTGGTGGAGCCATTCTATGATATCTGATCACTCGTACAAATCTATCCTCAAGTACTGCAATTTCACATCAGAGGAAACCTCTGAAAAATGTGATGATGCTTTTAGTCATGCGGTTAACTATGAATTTGGAAATATAGACCAGTACAGCATCTATACCCCGACGTGCACAACATCACAGAACAATACTGTCAGACACATACGATTCAAGAATCTTCATATGATTTCAGGTTATGATCCGTGTACCGAAAATTATGCAGAGAAATACTATAACCTTCCAGAAGTGCAGAAAGCAATGCATGCAAATCTTACCAACATTCCTTACAAATGGACTGCTTGCAGTGAAGTGCTCCTAAAAAATTGGAAGGATTCTGAAATTTCTGTGCTGCCCATATACAAAGAGTTAATTGCTGCAGGATTGAAAATATGGGTTTTCAGCGGGGACACTGATTCTGTGGTTCCGGTGACAGCCACAAGGTTTTCTCTCAACCACCTTAACCTCAGCATCAAAACTCGTTGGTATCCATGGTACTCTGGTGGACAGGTTGGTGGATGGACAGAGGTGTATAATGGTCTAACTTTTGCAACAGTAAGAGGAGCTGGTCATGAAGTTCCATTATTTCAGCCAAAGAGAGCTTACACCCTTTTCAAGTCCTTTTTGGCAGGAAAAGAACTACCAAAACATTGA 1383 0.4215 MMAFQSKVHIFFLCLLLIFAFSSVVAVAVPKEQEQDRISALPGQPRVAFSQFSGYVSVNEQHGRALFYWLTESPSSPQNKPLVLWLNGGPGCSSVAYGASEEIGPFRVNKTGSSLYLNRNAWNREANILFLESPAGVGFSYTNTSSDLKTSGDKRTAQDALIFLIRWLSRFPQYKYREFYIAGESYAGHYVPQLAKKIHDYNKKNPQIINLKGFIVGNAVTDSYNDGIGTVTYWWSHSMISDHSYKSILKYCNFTSEETSEKCDDAFSHAVNYEFGNIDQYSIYTPTCTTSQNNTVRHIRFKNLHMISGYDPCTENYAEKYYNLPEVQKAMHANLTNIPYKWTACSEVLLKNWKDSEISVLPIYKELIAAGLKIWVFSGDTDSVVPVTATRFSLNHLNLSIKTRWYPWYSGGQVGGWTEVYNGLTFATVRGAGHEVPLFQPKRAYTLFKSFLAGKELPKH* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00710 460 FunFam Carboxypeptidase 32 290 - -
Lapu3g00710 460 Gene3D alpha/beta hydrolase 32 290 IPR029058 -
Lapu3g00710 460 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 441 IPR001563 GO:0004185|GO:0006508
Lapu3g00710 460 Pfam Serine carboxypeptidase 43 453 IPR001563 GO:0004185|GO:0006508
Lapu3g00710 460 Gene3D - 313 350 - -
Lapu3g00710 460 FunFam Carboxypeptidase 360 454 - -
Lapu3g00710 460 ProSitePatterns Serine carboxypeptidases, serine active site. 181 188 IPR018202 GO:0004185
Lapu3g00710 460 Gene3D - 360 454 - -
Lapu3g00710 460 FunFam Carboxypeptidase 309 457 - -
Lapu3g00710 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 424 437 IPR001563 GO:0004185|GO:0006508
Lapu3g00710 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 167 192 IPR001563 GO:0004185|GO:0006508
Lapu3g00710 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 131 141 IPR001563 GO:0004185|GO:0006508
Lapu3g00710 460 PRINTS Carboxypeptidase C serine protease (S10) family signature 118 130 IPR001563 GO:0004185|GO:0006508
Lapu3g00710 460 SUPERFAMILY alpha/beta-Hydrolases 33 457 IPR029058 -
Lapu3g00710 460 ProSitePatterns Serine carboxypeptidases, histidine active site. 424 441 IPR033124 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00710 Lapu-Chr3 7526311 7532299 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00710 318 457 Calmodulin-binding Proteins AT2G22960 29.787 9.95e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00710 K16297 - gmx:100785391 884.789