Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00704 ATGCAGCAGAGTGATCAGACGGTGTTGAGCTTGAGGCCAGGCGGTGGAAAAGGCAGCAGGCTCCTGGGTCCTCGATTCGACTCCTCCTCCTCGTCTTCTGCCTCCCCTGCTTTTGGCTCCTTTCCTGCTGATCTTCCTCTCCTTCGTCCTCATGGCGGTGCTCCTTCTCCTTTCTCTATCAAGGCTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTGCGATATACCAGGGAGCAGCTTTTACAGCTCAGTGAGGGTATTGAGATCCTTGATGATGTTTTGAAGATCAAACAAGATATTGAAGCTGAACTTTTTGGTGAAGATCAAAGTTGGGCCCGCCCAGAAAACAATCCCTCACATCAATTTCAAAATCGATATTCGGAGCCAGATAATCGTGACTGGCGTGGACGATCTGGCCAACCTTTTGGTAATGCAGATGAGAGGTCTTGGGATAATCTCAAGGAGAATAGGGAGTTTGGAAATAACCGTCAGGACCAACTCAATTCTCAGTTTGGAAGGGCACAGATATCTTCTAACCAAGGGGGGGGACCTACCCCAACACTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGCACTCTCTCTGATATGGATCGTGTCTTAAAGACTGTTAAAGGAATACTAAATAAGTTGACTCCTGAGAAATTTGATCTCTTGAAGGGTCAGTTGATCGATTCTGGCATTACATCCGCTGACATATTGAAGGAAGTTATTTCACTGATATTTGATAAGGCAGTGCTAGAACCAACATTTTGCCCAATGTATGCCCAGCTGTGTTCTGATCTTAATGAAAAGCTGCCACCATTCCCATCTGATGAGCCTGGTGGGAAAGAAATCACTTTTAAGAGATTACTGTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCAGATAAACTGAGGGAAGAAGTGAGACAGATGACTGCTCCTGACCAGGAGATGGAGCGAAGGGATAAGGACAGACTTGTCAAGCTTCGAACTCTTGGAAACATTCGTTTAATTGGTGAGCTGTTGAAGCAAAAAATGGTTCCCGAAAAGATTGTTCATCACATTGTTCAGGAGCTTTTAGGTGCTTCTGACAGCAAGGTCTGTCCGGCCGAGGAAAATGTTGAAGCCATATGTCAATTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCACGGCGTATTAATGATATGTACTTTAGTCGTTTGAAAGAATTGAGCACCAATCCCCAACTTGCTCCACGGCTGCGGTTTATGGTTCGTGATGTCCTAGATTTGCGTTCTAATAACTGGGTTCCTAGACGTGAGGAGGTGAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCAGAAAAGAATCTTGGATTGCGTCCAGGTGCCACTGCAAGTATGAGAAATAGCCGTGTAGTTTCTGGTGGTCAAGGAAATGTCAATCCGGGAGGATTCCCAATTGCCCGACCTGGTACTGGTGGTATGATGCCTGGAATGCCGGGCACGAGAAGGATGCCTGGAATTGATAATGACAACTGGGAGGTGCCTAGGACTAGATCAATGCCTCGAGGAGACATGTCAGGCATGCAAACTGGGGGACGTGGTCAGTCTCCTTTCATTTCCAAGACATCAACTGTTAACTCAAAGTTACTACCTCAAGGTAGTGGTGGTACTATAAGTGGGAGAAGCAGTGCCCTGGTGCATGGAGGTGGTGGTGCTCCTTCTGCTCGTCCACAAAACATTGGTTTTAGTACTGAACCCCCTCCTCAAGTCCCTTCCCCTGTTAAATCTGTTTCTGCCACACCTTCTGAGAAGCCACGAGCTCCAGCTCCAAAATTAAATGTTGATGAACTTCAGCGTAAAACTCGTTCTCTTCTGGAAGAATATTTTGGTGTTCGGCTTTTGGATGAGGCATTGCAGTGTGTGGAGGAACTAAAAGCTCCAGCTTATCATCCTGAGGTTGTGAAGGAAGCCATTTCCCTTGGACTAGATAAAAGTCCGCCATGCATTGAACCTGTTGGCAGTCTTCTTGAGTATCTCTTCATTAAGAAGATTCTTTCAGCTAGAGACATAGGGACTGGGTGCATGTTATTTGCTTCTCTGCTGGATGATATCGGCATAGATTTACCCAAAGCACCAAATAATTTTGGGGAAATAATAGGGAAACTAGTTTTGTCTGGGGCTTTGGATTTTAAGGTGGTGAGAGAAATCCTTAAGAAGGTGGAGGATGACCGGTTCCAGAAAGCAATATTTTCCTCTGCGTTGCAGGTAATTAGCTCTGCATCTGGGCAAGCTGTGTTGGATTCACAAGCATCTGATATTGAGGCCTGTCAGAGTCTGTTCAACTGA 2355 0.4599 MQQSDQTVLSLRPGGGKGSRLLGPRFDSSSSSSASPAFGSFPADLPLLRPHGGAPSPFSIKAGDSRFEGRERVRYTREQLLQLSEGIEILDDVLKIKQDIEAELFGEDQSWARPENNPSHQFQNRYSEPDNRDWRGRSGQPFGNADERSWDNLKENREFGNNRQDQLNSQFGRAQISSNQGGGPTPTLVKAEVPWSARRGTLSDMDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKEVISLIFDKAVLEPTFCPMYAQLCSDLNEKLPPFPSDEPGGKEITFKRLLLNICQEAFEGADKLREEVRQMTAPDQEMERRDKDRLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGASDSKVCPAEENVEAICQFFNTIGKQLDESPKSRRINDMYFSRLKELSTNPQLAPRLRFMVRDVLDLRSNNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASMRNSRVVSGGQGNVNPGGFPIARPGTGGMMPGMPGTRRMPGIDNDNWEVPRTRSMPRGDMSGMQTGGRGQSPFISKTSTVNSKLLPQGSGGTISGRSSALVHGGGGAPSARPQNIGFSTEPPPQVPSPVKSVSATPSEKPRAPAPKLNVDELQRKTRSLLEEYFGVRLLDEALQCVEELKAPAYHPEVVKEAISLGLDKSPPCIEPVGSLLEYLFIKKILSARDIGTGCMLFASLLDDIGIDLPKAPNNFGEIIGKLVLSGALDFKVVREILKKVEDDRFQKAIFSSALQVISSASGQAVLDSQASDIEACQSLFN* 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00704 784 MobiDBLite consensus disorder prediction 108 148 - -
Lapu3g00704 784 Gene3D - 201 436 - -
Lapu3g00704 784 SUPERFAMILY ARM repeat 202 438 IPR016024 -
Lapu3g00704 784 SMART ma3_7 620 732 IPR003891 -
Lapu3g00704 784 MobiDBLite consensus disorder prediction 506 613 - -
Lapu3g00704 784 SMART if4_15 209 435 IPR003890 GO:0003723|GO:0005515
Lapu3g00704 784 FunFam Eukaryotic translation initiation factor isoform 4G-2 200 436 - -
Lapu3g00704 784 Gene3D - 612 779 - -
Lapu3g00704 784 ProSiteProfiles MI domain profile. 619 741 IPR003891 -
Lapu3g00704 784 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 58 768 IPR045208 GO:0003743
Lapu3g00704 784 MobiDBLite consensus disorder prediction 1 63 - -
Lapu3g00704 784 MobiDBLite consensus disorder prediction 532 564 - -
Lapu3g00704 784 Pfam MIF4G domain 209 435 IPR003890 GO:0003723|GO:0005515
Lapu3g00704 784 Pfam MA3 domain 620 732 IPR003891 -
Lapu3g00704 784 FunFam Eukaryotic translation initiation factor isoform 4G-2 613 774 - -
Lapu3g00704 784 SUPERFAMILY ARM repeat 613 771 IPR016024 -
Lapu3g00704 784 MobiDBLite consensus disorder prediction 24 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00704 Lapu-Chr3 7478400 7484896 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00704 1 782 Eukaryotic Initiation Factors Gene Family AT5G57870 66.247 0.0 991
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00704 K03260 - gmx:100781275 1388.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00704 3 7478400 7484896 Lapu3g00704 3 7478400 7484896 ECH