Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00696 ATGGGTTTGTTTAGATTAGCAGTGTTCCTGTTTTTCTTTCTTGATACTGTTCATTCCGCAGTTCTTGGGAAAGAAAATGCTGGCATCTTGAATGGAAAAAAATCACTTATTTCATTCATGTCAGGCATTGTTTCAGACCCTCAAAAAGCTCTAGATAGTTGGAAGTCACCCGGTGTTCATGTTTGTGATTGGTCAGGTGTGAGATGCAACAATGCAAGTGACATGATAGTAGAGGTTGATCTCAGTGGAAGGTCTCTAGGAGGCACCATTTCCCCTGCTCTTGCTAATATCTCTTCATTGCAAATTCTTGATCTTTCTGGAAACTTTTTGGTGGGTCAGATTCCAAAAGAAATAGGCCGTTTGGTTCAGCTTGTACAACTCAGTTTGTCTGGGAATTTTCTTGAGGGTCACATTCCGTCCGAGTTTGGTTCACTTCACAACTTGGACTACCTTGACTTAGGAAGCAATCTTCTTGAGGGAGAGATTCCCTCATCGCTCTTCTGCAATGGGACTTCACTGGGTTATGTGGACCTCTCCAATAATTCCTTAGGGGGGGAAATCCCCTTGAACAGAGAGTGTATCCTTAAAGAACTCAAGTTCCTATTGCTTTGGTCTAACAAGCTTGTAGGAAAAGTTCCTTTAGCTCTTTCAAACTCCACCAAGCTAAAATGGCTTGATTTGGGGTTGAATATGTTGAGTGGAGAGCTTCCTTCTAAGATTGTAAGGAATTGGCTACAACTACAATTCCTCTACTTGTCCTACAACAATTTTACTAGCCATGATGGTAATACCAACCTTGAGCCTTTCTTTGCCTCCTTGGTGAATTTGTCACACTTTCAAGAACTTGAATTGGCGGGAAATAATCTTGGTGGGAAGCTGCCTCATAATATTGGTGATCTTCCAACCAGCCTGCAACAACTCCACCTAGAAAAAAACCTCATATATGGCTCTATACCTCCTCATATTGCCAACCTTGTCAACCTGAATTTCTTGAAGTTGTCTAGTAACCTAATAAATGGATCAATCCCTCCCTGCCTCAGCCATATGAATAGGCTAGAAAGAATTCATTTGTCAAATAATTCACTATCTGGTGAGATTCCTTCAACCCTTGGTGATATTCAGCATCTGGGACTTCTAGACTTGTCAAGAAACAAGCTTTCTGGCCCAATACCAGACAGTTTTGCAAATCTTCCCCAGTTAAGAAGGCTTTTACTTTATGACAACCAGCTTTCTGGAACAATCCCACCAAGTCTGGGAAAATGTGTCAATTTGGAGATTTTAGACTTGTCTCACAACAATATAACTGGGTTAATTCCTGCAGAAGTTGCAGCCTTGAATAGCTTGAAACTATACCTCAATTTATCAAACAATAACTTACATGGGTCTTTACCATTAGAACTCAGCAAAATGGACATGGTCCTAGCTATTGATTTATCCATGAATAACCTCTCTGGCAGCATCCCACCTCAACTGGAAAGTTGCATAGCACTGGAGTACCTCAACCTCTCTGGTAACTACTTTGAAGGCCCTCTCCCTTATTCATTAGGTCAATTGCTCTATGTCAGAGCACTTGATGTGTCTTCAAATCAGTTGACTGGGGCAATACCAGAGTCCATGCGGTTGTCTCCCTCGCTCAAGGAACTTAATTTCTCTTTCAACAAATTCTCAGGGAAAGTGTCAAACAAGGGAGCATTTTCAAATCTTACCATAGACTCTTTCCTGGGAAATGGTGGTCTCTGTGGCCCGTTTAAAGGCATGCAACAATGTCACAAGAAATGTAGTTATCATTTGGTGTTCTTGTTAATTCCTGTGTTACTCTTTGGCACCCCTCTCCTATGCATACTTTTTAGGTACCCAATGGTAATAAAGTCAAGAGTGAAAAAACGAATTGCTATTGTTCGCAGAGGTGATTTGGAGGATGTAGAAGAGGGAGCAAAAGAGGTCAAGTACCCAAGAATTACATATGAACAACTTAAAGAAGCCACTGGAGGCTTCAGAGCTTCAAGCTTAATTGGTTCAGGCCGTTTTGGGCAGGTCTACGAAGGAATGCTCCAAGATAATACAAGAGTAGCTGTGAAGGTGTTGGATACAACACAAGGTGAGATTTCAAGGAGCTTTAGAAGGGAATGTCGAATACTAAAAAAGATAAGACACAGAAATTTAATAAGGATCGTAACAATTTGCTGTAGGCCAGAATTTAATGCTCTTGTTTTTCCCTTGATGCCAAATGGTAGCCTTGAGAGGCACCTATATCCAAGCCAAAAATTGAATGTGGTTCAATTAGTAAGAATCTGCAGTGATGTGGCCGAGGGAATGGCCTATCTGCACCATTACTCTCCAGTGAAAGTAGTGCATTGTGATCTTAAGCCAAGCAATATACTCCTTGATGAAGATATGACAGCATTGGTTACTGATTTTGGAATTTCAAGGCTTGTACAAATTGAAGAGAATCCATCCACCAGCATCTCATCTTTCAGTTCAACACATGCTTTGTTATGTGGCTCGATTGGTTATATAGCTCCTGAGTATGGAATGGGAAAAGATGCTTCAACTGAGGGTGATGTTTACAGTTTTGGAGTTCTTGTTTTGGAGATGGTTTCAGGTAGACGCCCCACAGATGTGCTTAGCCATGAAGGTTCAAGCTTGTGTGAGTGGCTTAAGAAGCTATACACACAACCACACCACCTTCAAAACTTTGTTCAACAAACACTTCAAAGGTGCTATCCATGTGGTCTGCCAAACCCTCACAGCAAAGTTTGGAAAGATGTTATTCTGGAACTCATTGAGCTGGGGCTAATCTGCACTCAGCACAATCCTTCAACAAGACCAACCATGCACGATATAGCCCAAGAGATGGAGAGGTTAAAAGACTACATCACTAAGTCAACCTTCACCCCTCATTCAAGCTAA 2910 0.4141 MGLFRLAVFLFFFLDTVHSAVLGKENAGILNGKKSLISFMSGIVSDPQKALDSWKSPGVHVCDWSGVRCNNASDMIVEVDLSGRSLGGTISPALANISSLQILDLSGNFLVGQIPKEIGRLVQLVQLSLSGNFLEGHIPSEFGSLHNLDYLDLGSNLLEGEIPSSLFCNGTSLGYVDLSNNSLGGEIPLNRECILKELKFLLLWSNKLVGKVPLALSNSTKLKWLDLGLNMLSGELPSKIVRNWLQLQFLYLSYNNFTSHDGNTNLEPFFASLVNLSHFQELELAGNNLGGKLPHNIGDLPTSLQQLHLEKNLIYGSIPPHIANLVNLNFLKLSSNLINGSIPPCLSHMNRLERIHLSNNSLSGEIPSTLGDIQHLGLLDLSRNKLSGPIPDSFANLPQLRRLLLYDNQLSGTIPPSLGKCVNLEILDLSHNNITGLIPAEVAALNSLKLYLNLSNNNLHGSLPLELSKMDMVLAIDLSMNNLSGSIPPQLESCIALEYLNLSGNYFEGPLPYSLGQLLYVRALDVSSNQLTGAIPESMRLSPSLKELNFSFNKFSGKVSNKGAFSNLTIDSFLGNGGLCGPFKGMQQCHKKCSYHLVFLLIPVLLFGTPLLCILFRYPMVIKSRVKKRIAIVRRGDLEDVEEGAKEVKYPRITYEQLKEATGGFRASSLIGSGRFGQVYEGMLQDNTRVAVKVLDTTQGEISRSFRRECRILKKIRHRNLIRIVTICCRPEFNALVFPLMPNGSLERHLYPSQKLNVVQLVRICSDVAEGMAYLHHYSPVKVVHCDLKPSNILLDEDMTALVTDFGISRLVQIEENPSTSISSFSSTHALLCGSIGYIAPEYGMGKDASTEGDVYSFGVLVLEMVSGRRPTDVLSHEGSSLCEWLKKLYTQPHHLQNFVQQTLQRCYPCGLPNPHSKVWKDVILELIELGLICTQHNPSTRPTMHDIAQEMERLKDYITKSTFTPHSS* 970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00696 969 ProSitePatterns Protein kinases ATP-binding region signature. 671 693 IPR017441 GO:0005524
Lapu3g00696 969 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 741 965 - -
Lapu3g00696 969 SUPERFAMILY L domain-like 269 362 - -
Lapu3g00696 969 ProSiteProfiles Leucine-rich repeat profile. 423 444 IPR001611 GO:0005515
Lapu3g00696 969 SUPERFAMILY Protein kinase-like (PK-like) 647 952 IPR011009 -
Lapu3g00696 969 Pfam Leucine rich repeat N-terminal domain 34 70 IPR013210 -
Lapu3g00696 969 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 30 188 - -
Lapu3g00696 969 Pfam Protein kinase domain 667 950 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00696 969 SUPERFAMILY L domain-like 41 260 - -
Lapu3g00696 969 Gene3D Phosphorylase Kinase; domain 1 644 739 - -
Lapu3g00696 969 Gene3D Ribonuclease Inhibitor 194 263 IPR032675 -
Lapu3g00696 969 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 379 953 - -
Lapu3g00696 969 Pfam Leucine Rich Repeat 423 441 IPR001611 GO:0005515
Lapu3g00696 969 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 373 593 - -
Lapu3g00696 969 SMART LRR_typ_2 422 444 IPR003591 -
Lapu3g00696 969 SMART LRR_typ_2 97 121 IPR003591 -
Lapu3g00696 969 SMART LRR_typ_2 397 421 IPR003591 -
Lapu3g00696 969 SMART LRR_typ_2 276 300 IPR003591 -
Lapu3g00696 969 SMART LRR_typ_2 145 169 IPR003591 -
Lapu3g00696 969 SMART LRR_typ_2 373 396 IPR003591 -
Lapu3g00696 969 SMART LRR_typ_2 325 349 IPR003591 -
Lapu3g00696 969 ProSiteProfiles Protein kinase domain profile. 665 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00696 969 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 270 366 - -
Lapu3g00696 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Lapu3g00696 969 SMART serkin_6 665 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00696 969 Gene3D Ribonuclease Inhibitor 264 596 IPR032675 -
Lapu3g00696 969 SUPERFAMILY L domain-like 330 581 - -
Lapu3g00696 969 Gene3D Transferase(Phosphotransferase) domain 1 741 965 - -
Lapu3g00696 969 Pfam Leucine rich repeat 352 410 IPR001611 GO:0005515
Lapu3g00696 969 Gene3D Ribonuclease Inhibitor 31 193 IPR032675 -
Lapu3g00696 969 CDD STKc_IRAK 671 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00696 Lapu-Chr3 7403750 7407640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00696 34 965 Receptor kinase-like Gene Family AT5G20480 33.333 1.47e-157 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Lapu3g00696 Pkinase 2.5e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00696 - - gmx:100792446 1657.88