Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00671 ATGGGTAGTTTAGCTAGTCATCTTCCTCTAATTGTTATGGTAGGTCTGCAAGTTCATTATGCAGCACTTGCCATCTTCACAAGAGCAGCCCTGTTAGATGGGTTGAGTACAACAATCTTTGTAGTGTACAGGCAAGGCATAGCCACTTTGGCTTTGGCCCCTATGTTTTTCTCTCCTAAGAGGAGACAATCAGTAAAAAGTTGTTTGGGATTCAGGAGCTTCTTTTTGATGTTCGTCACCGCTCTTGTTGGAGTCACAGCAAACCAGAATGCATATTTCAGAGGTTTATATTATTCATCTTCTACTGCAGCTACGGCAATGAGTAATCTGATACCTGCTTTAACGTTTGTAATTGCAGCAATTGCGGGATTTGAGAAAGTTGAACTACGAAGCTTGAGAAGCATGGCCAAGATATTAGGGACAGTTTGTTGCGTTAGTGGAGCCTTAACCATGGCATTGGTGAAAGGGCATAAACTGTTACACACGGAGTTCCTTCCTTCAATACATCTCACCGGCAGTGAATCTGACGATTGGCTGCTGGGTTGTCTATTGCTTTTGGCAAGCAGTGTTTTCTGGTCTTGTTGGATGATCCTGCAGGTACCAATCTCTTCGTCCTGCCCAGATCATTTATTATCAACCTTTTGGATGTGTCTCTTCTCAACATTACAGTCAGCCCTATTTGCACTACTCTCAGAACCGGATCTTGAAGCATGGATTTTGCATTCACCTTTGCAGATTTCATGTTCTTTATACGCTGGAATCGGAATAGCGGTTAGCTTCTTTATTCAATCCTGGTGCATCTCAGAAAGAGGTCCTCTATACTGTGCAATGTTCAACCCCTTAGCAACAGTCATCACTGCTTTGATAAGTGCAACATTCTTACAAGAAGAACTATACGTTGGAAGTTTGATAGGAGCTGTTGGAGTTATTGGTGGTTTATATATTGTGCTTTGGGGTAAAGCCGAAGAGTTTGCTGAGATTAAACAAGAGGCACCACAATCAAACTTGCAAGATGATGAGATAAGTAGTAGGATAGATTTGGAACAACCCCTTCTATCAGATAAACCTGAAGATGTAACAGAAGCAGATAGCAAGGTGTAG 1101 0.4205 MGSLASHLPLIVMVGLQVHYAALAIFTRAALLDGLSTTIFVVYRQGIATLALAPMFFSPKRRQSVKSCLGFRSFFLMFVTALVGVTANQNAYFRGLYYSSSTAATAMSNLIPALTFVIAAIAGFEKVELRSLRSMAKILGTVCCVSGALTMALVKGHKLLHTEFLPSIHLTGSESDDWLLGCLLLLASSVFWSCWMILQVPISSSCPDHLLSTFWMCLFSTLQSALFALLSEPDLEAWILHSPLQISCSLYAGIGIAVSFFIQSWCISERGPLYCAMFNPLATVITALISATFLQEELYVGSLIGAVGVIGGLYIVLWGKAEEFAEIKQEAPQSNLQDDEISSRIDLEQPLLSDKPEDVTEADSKV* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00671 366 PANTHER WAT1-RELATED PROTEIN 8 324 IPR030184 GO:0016020|GO:0022857
Lapu3g00671 366 MobiDBLite consensus disorder prediction 331 366 - -
Lapu3g00671 366 Pfam EamA-like transporter family 10 142 IPR000620 GO:0016020
Lapu3g00671 366 Pfam EamA-like transporter family 180 317 IPR000620 GO:0016020
Lapu3g00671 366 MobiDBLite consensus disorder prediction 341 366 - -
Lapu3g00671 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 215 320 - -
Lapu3g00671 366 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00671 Lapu-Chr3 7175967 7179056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00671 1 354 Nodulin-like Gene Family AT4G30420 43.968 6.11e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00671 - - gmx:100817369 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00671 3 7175967 7179056 Lapu3g00671 3 7175967 7179056 ECH