Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00670 ATGGCGGATTCTTCAAGCAACTCAAAAGATAAGAACAACACGCGCGTCTACCATCCCTACCAGGATCTCAACGTTCCAATCCAAAAGCTCTACAACCTCCCCACCGCGCTGGAGCACCTCTTTCCGGAAGAAGCAGCCAGAACCCACCGCTCCTGGGGCGACAACCTCCAGTACTATACCGGCACCGCCTACCTCTCCGGTGCCATCATCGGCGCTGCTAGAGGCACCTTCCAGGGCCTTCGCGAGGCCGAGTCCGGCGACTCCCTCAAAATCCGACTCAACCGAGTCCTCAACTCGGGCGGCCACGCGGGTCGCAAACTCGGCAACTCGCTCAGCATTCTTGGCCTCATCTTCGCCGGCCTCGAGAGTGGGATGATCCACGCCAGGGGCACCGATGACTTCGTCATGTTTTTCGTTAAAAATATG 426 0.5798 MADSSSNSKDKNNTRVYHPYQDLNVPIQKLYNLPTALEHLFPEEAARTHRSWGDNLQYYTGTAYLSGAIIGAARGTFQGLREAESGDSLKIRLNRVLNSGGHAGRKLGNSLSILGLIFAGLESGMIHARGTDDFVMFFVKNM 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00670 142 Pfam Tim17/Tim22/Tim23/Pmp24 family 58 135 - -
Lapu3g00670 142 PANTHER TIM23 35 134 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00670 Lapu-Chr3 7162132 7162830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00670 5 133 Chloroplast and Mitochondria Gene Families AT1G17530 51.908 1.11e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00670 K17794 - gmx:100779163 239.58