Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00667 ATGCGAAATATCAACTCCGTGAAGCAAGAATTCCTCAGAAAATGGATATGGGGTCTCAGAAAATATAGCTCTCAGAAAAAGAACATGAGTCTGTTGGAGAGAAAGAAAGCCATAAAGCTGTCAGCAGATTTGGCCATGGCTTCCACCAGAAACAAAACCACTCGCTGGAGCAAGGCCCTCATAGCCAATGCTTCCAAAAATAGCAACAACAAAGCCCTCACGGAACACGTGCTAGACTCATCACCGCCAAAGAGCGTAAGGAAAAGCTCCACGAATTATCCCCACGGCACAGGGATCAGAAGCTGCAGAAACACCTTGAGAAGAAACCGTGCAGTCCACAGACCAAAAGATAGGGTGGTGGCGAGTTTCATTGCCAAAAAGCTGGTCCAGAAGAGAACGCGAAGGCTCAAGAGTCTCTTACCAGGAGGAGAATTCATGGACGATGAGTCTCTGGTTGAGGAAACCCTAGATTATGTACAATCACTGCGAGCTCAAGTTGAAGTAATGAGATGTCTCGTCACTGCCTCAGAGCTCATGATCCTAAATCCATCGTAA 555 0.4667 MRNINSVKQEFLRKWIWGLRKYSSQKKNMSLLERKKAIKLSADLAMASTRNKTTRWSKALIANASKNSNNKALTEHVLDSSPPKSVRKSSTNYPHGTGIRSCRNTLRRNRAVHRPKDRVVASFIAKKLVQKRTRRLKSLLPGGEFMDDESLVEETLDYVQSLRAQVEVMRCLVTASELMILNPS* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00667 184 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 7 174 IPR044660 GO:0006355
Lapu3g00667 184 CDD bHLH_AtIBH1_like 126 173 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00667 1 177 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 39.459 6.32e-30 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00667 - - pvu:PHAVU_003G151300g 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00667 3 7115828 7117082 Lapu3g00667 3 7115828 7117082 ECH