Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00658 ATGCTATCAAGATCTTGCTTGGGGCTGTTGAATTTGGTATCAGTGGATGATTACCAAGCGCTGGGACGGGTTCCGCGGGTGGTGACCAAGGTGGCCGGAGACGTACCGGAGTTGGACATGAACGGCATGGAGAATTCCGGATCCGACGAGGTGGTTTCCCCAGTAACGCGCGAGAGGAGGATCGTTGTGGCGAATCAGTTACCGATACGCGCGTTTCGTGAGGGGAAGAAATGGAGGTTCGAGTGGGACAGAGACAGCCTCGTCCTTCAGCTCAAAGACGGGTTCCCTTCGGATGTGGAAGTGTTGTACGTTGGTTCTTTGAAAGCAGATATCGAAGCGTGCGAACAAGAAGTTGCTCAGTTACTCCTCGAAAAGTTCCGCTGCGTCCCAACGTTTCTTCCCCCAGAGGTTCACAACAAATTCTACCATGGTTTCTGCAAGCATTACCTGTGGCCTCTCTTCCACTACATGCTGCCCATGTCGCCTAGCCAGGGCGCGCACTTCGACCGCGACCAGTGGAAGGCCTACGTCCTGGCCAACAAGATCTTCGCAGACAAGGTCACCGAGGTTATCAACCCCGACGAGGATTATGTCTGGGTCCACGATTACCACCTCATGATCCTTCCCACTTTCCTCCGGAAGCGGTTCCACCGCGTGAAGCTGGGGTTCTTCTTGCACAACACGTTTCCCTCCTCGGAGATATACCGGACTTTGCCAGTGCGCGAGGACATCCTCCGGGCGTTTCTCAACTGCGATTTGATCGGCTTCCACACGTTCGACTACGCCCGGCATTTCTTGTCGTGTTGCAGCAGGATGTTAGGGCTGGATTACGAGTCCAAGAGGGGTTACATTGGTTTGGATTACTACGGTAGGACCGTGACGATCAAGATCCTCCCCGCGGGGATCCATATGGGCCTCTTGGAGTCGGTGTTGTCGTTGCCGCAGACTGCAACAAGGGTGAAGGAATTGAAGAAGGAGTATGAGGGGAAGGTTGTGATATTGGGGGTGGATGACATGGACTTGTTCAAGGGGATTAGTTTGAAGTTTTTGGCTTTGGGGAAGCTTCTGGAAGTGGACGAAGGTTTACGGGGTCGTGTCGTGTTGGTTCAGGTTCTGAACGCTGCCAGGAGCAGAGGGAAGGATATTCAGGACGTTAAGAGCGAGAGCGAGGCCATTGCGAGGGAGATCAATGAGAAGTATTCGCAACCGGGTTACAAGCCTATTGTTTTCGTGAATGGACCCATTTCGACGCAAGAGAAGGTGGCGTATTACTCCATTTCCGAGTGTTGCGTCGTGAATGCTGTGAGGGATGGGATGAATTTGGTGCCTTATGAGTACACTGTGTGTAGGCAGGGGACTGTTGCTTTGGATAAGGCTCTTGGGCTTGACGGAGATGATAAGAAATCCCTTAAACAGAGCGTTATCATCGTGTCTGAGTTCATAGGGTGTTCCCCTTCTCTCAGTGGAGCCATCAGGGTTAATCCGTGGAACATTGATGAAGTCGCAGAGGCCATGAATTCGGCTGTCACAATGTCAGAGGCAGAGAAGCATTTGCGGCATGAGAAGCATTACAAGTACATTAGCTCTCATGATGTGGCTTACTGGGCTAGGAGTTTTGATCAGGATTTAGATAGAGCCACTAGAGAGCATTATTCCAAGAGGTACTGGGGTGTTGGATTCGGATTGGGGTTTAGAATTGTTGCTCTGGATCCTACCTTTAGGAAGCTCTCTGTGGATCACATTGCCACTGCTTATAGAGATACACACAGTCGGTTGATCCTTTTGGACTACGATGGCACCATGATGCCGCCGGCCTCAATAAACAAGACTCCAAGCATGGAAGTTATTTCTCTCTTGAATTACTTATGTAGTGACCCCGAAAATATGGTGTTCATTGTGAGCGGCAGGGATAAGGATTGCTTGAGCAAATGGTTTTCTCCTTGTGAGAAATTGGGTCTCTCTGCTGAGCACGGTTACTTCACCAGGTGGAGTAAGGATTCTCCTTGGGAGGCTTGCGGATTTACGACCGATTTTGAATGGAAAATGATTGCAGAACCTGTGATGGCGCTTTATACAGAAGCAACGGATGGTTCCTTCATTGAACACAAGGAAAGCGCAATGGTTTGGCATCATCAAGAAGCAGATCCTTATTTTGGATCATGCCAAGCAAAAGAACTTCTTGATCACTTGGAGAGTGTGCTGGCCAACGAGCCAGTTGTGGTTATAAGGGGACAGCATATAATTGAAGTTAAACCTCAGGGTGTAAGCAAGGGTAAAGTGGTTGAAGACATTATCTCTACCATGCGAAATAAGGGGAAGTCACCAGATTTTCTACTATGCATAGGTGATGATCGCTCCGACGAAGATATGTTTGAAAGCATTGCTCGTTCGGTGTCTAATCCAGCTCTGCCAACTATATCCAAAGTGTTTGCTTGCACTGTTGGACAGAAACCAAGTATGGCAGAATACTATTTGGATGATACTAGTGAAGTAATCAATTTGCTTGAAGGACTTGCATGCCCATCAGCACCATCCTCATCCATAATAACTTCTCAGGAATCGTGA 2565 0.4916 MLSRSCLGLLNLVSVDDYQALGRVPRVVTKVAGDVPELDMNGMENSGSDEVVSPVTRERRIVVANQLPIRAFREGKKWRFEWDRDSLVLQLKDGFPSDVEVLYVGSLKADIEACEQEVAQLLLEKFRCVPTFLPPEVHNKFYHGFCKHYLWPLFHYMLPMSPSQGAHFDRDQWKAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTFLRKRFHRVKLGFFLHNTFPSSEIYRTLPVREDILRAFLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLDYYGRTVTIKILPAGIHMGLLESVLSLPQTATRVKELKKEYEGKVVILGVDDMDLFKGISLKFLALGKLLEVDEGLRGRVVLVQVLNAARSRGKDIQDVKSESEAIAREINEKYSQPGYKPIVFVNGPISTQEKVAYYSISECCVVNAVRDGMNLVPYEYTVCRQGTVALDKALGLDGDDKKSLKQSVIIVSEFIGCSPSLSGAIRVNPWNIDEVAEAMNSAVTMSEAEKHLRHEKHYKYISSHDVAYWARSFDQDLDRATREHYSKRYWGVGFGLGFRIVALDPTFRKLSVDHIATAYRDTHSRLILLDYDGTMMPPASINKTPSMEVISLLNYLCSDPENMVFIVSGRDKDCLSKWFSPCEKLGLSAEHGYFTRWSKDSPWEACGFTTDFEWKMIAEPVMALYTEATDGSFIEHKESAMVWHHQEADPYFGSCQAKELLDHLESVLANEPVVVIRGQHIIEVKPQGVSKGKVVEDIISTMRNKGKSPDFLLCIGDDRSDEDMFESIARSVSNPALPTISKVFACTVGQKPSMAEYYLDDTSEVINLLEGLACPSAPSSSIITSQES* 855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00658 854 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 52 308 - -
Lapu3g00658 854 CDD HAD_TPP 592 833 - -
Lapu3g00658 854 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
Lapu3g00658 854 Pfam Glycosyltransferase family 20 59 544 IPR001830 GO:0003824|GO:0005992
Lapu3g00658 854 FunFam Alpha,alpha-trehalose-phosphate synthase 310 528 - -
Lapu3g00658 854 NCBIfam trehalose-phosphatase 590 838 IPR003337 GO:0003824|GO:0005992
Lapu3g00658 854 Coils Coil 104 124 - -
Lapu3g00658 854 SUPERFAMILY HAD-like 591 838 IPR036412 -
Lapu3g00658 854 CDD GT20_TPS 59 543 IPR001830 GO:0003824|GO:0005992
Lapu3g00658 854 Gene3D Glycogen Phosphorylase B; 53 308 - -
Lapu3g00658 854 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 50 839 IPR001830 GO:0003824|GO:0005992
Lapu3g00658 854 Gene3D Glycogen Phosphorylase B; 309 528 - -
Lapu3g00658 854 Gene3D - 590 707 IPR023214 -
Lapu3g00658 854 Gene3D - 720 847 IPR023214 -
Lapu3g00658 854 NCBIfam HAD-IIB family hydrolase 592 796 IPR006379 -
Lapu3g00658 854 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 852 - -
Lapu3g00658 854 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Lapu3g00658 854 Pfam Trehalose-phosphatase 594 829 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00658 Lapu-Chr3 7006519 7010069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00658 10 845 Trehalose Biosynthesis Gene Families AT2G18700 68.327 0.0 1190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00658 K16055 - gmx:100810498 1584.31