Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00635 ATGCCGAAACCATCTACCGACGCAATTAGTATGGGGAAAAGGAGCCTGGAGGGTGGAGAAGATGATCAGCCTGAACGAAAGAGGCCTGCTCTCGCCAGTGTAATTGTTGAAGCTCTCAAGGTGGACAGTTTGCAGAAGCTTTGCTCATCTTTAGAGCCTATTCTACGTAGAGTTGTGAGTGAAGAGGTGGAACGAGCTTTGGCAAAGTTAGGTCCTGCAAGACTTGGTGGAAGGTCTCCTCCTAAAATGATTGAAGGCCCTGATGGTAGAAACTTGCAGCTGCAATTTAAGTCCCGGCTGTCTCTTCCCCTCTTCACAGGAGGAAAAGTAGAAGGCGAGCAGGGGGCTCCAATACATGTTGTTCTAATTGATGCCAACTGTGGAAGCGTTGTAACATCTGGACCTGAATCCTCTGTTAAGCTTGATGTTGTTGTCCTTGAAGGTGATTTTAACAATGAAGATGATGAAGATTGGACCCAGGATGATTTTGAAAGCCATGTGGTAAAAGAACGTGAAGGAAAGAGACCTTTGTTAACTGGGGACCTGCAAGTGACACTCAAGGAAGGAGTTGGAACATTAGGGGAACTGACCTTTACAGATAATTCAAGCTGGATACGGAGCCGTAAATTCCGGCTTGGGCTGAAGGTTGCCTCAGGTTTTTGTGAGTCCATACGCATTCGGGAAGCTAAGACAGTGGCTTTCACAGTTAAAGATCATAGAGGAGAATTATATAAGAAGCACTACCCTCCTGCATTGACTGATGAAGTGTGGAGATTGGAGAAGATAGGCAAGGATGGATCATTCCACAAGAAGCTGAATAATGCAGGAATAGTCTCAGTTGAAGACTTTCTTCGGCTTGTGGTTAAAGATCAACAGAAATTGCGGAATATCCTTGGAAGTGGTATGTCAAACAAGATGTGGGAGGCTCTTTTAGAGCATGCAAAAACATGTGTTCTAAGTGGGAAGCTCTATGTTTATTATCCCGAAGATGCAAGAAATGTTGGTGTTATTTTTAACAACATCTATGAGCTGCGTGGCCTTATATCCGGAGAACAATTCTATTCTGCGGATTCTCTCACTGAGACCCAGAAGGTTTATGTAGATTCGTTGGTGAAGAAAGCATACGAAAATTGGGAACAGGTGGTGGATTATGATGGCAAATCACTTGTGAATGGTAACCAAAATAACAGGTCTATTACATCTGAAAACGAACTTCGTGTGGAGTCAATTGATTATGGTGGTGGTTTAGATAATCAACTTCAACTGCCGGGACTTCCAGTGTCTGTTCCTTCTGAACAGCAAATGAATTCTGGGATGTCGGTTGGGGGTTATAACGATACTGTGGTGACACGATATCCAACCCAGTCACTGATTTCAAACTCCAGTTCCCGGAGTCATTTTGATAGCTCATTATATCTGTCTAATGACCAATTAATCAACAATACTCACCAAACCCCAAACATTAGAAACGATCATGGCACGGTTGGATTAGCTCTTGGACCTCCTCAATCATCGACGTCAGGGTTCCATGCTGGTAGCTCTTCTATTCAGCCATCTACTCTAAACCCTTTTGATGATTGGTCACACAACAGGGACAAGGGGGTCGATGAATTCTTTTCGGAAGAAGAAATTCGCCTCAGAAGTCATGAAATGCTAGAGAATGAAGATATGCAGCACTTGCTTCGTCTCTTCAGCATGGGAGGTCATGGGTCCATGAGTGCGGAGGATGGCTATGCATTCCCAACATTCATGCCATCTCCCAATATACCAAACTATGATGAGGATCGCTCTCGCCCAGGAAGAGCTGTTGTGGGATGGTTGAAGATCAAGGCAGCAATGAGGTGGGGCTTCTTTATCAGGAAGATAGCAGCTGAGAAGCGGGCACAGATAGAGGAGTTAGATGAATAG 1908 0.445 MPKPSTDAISMGKRSLEGGEDDQPERKRPALASVIVEALKVDSLQKLCSSLEPILRRVVSEEVERALAKLGPARLGGRSPPKMIEGPDGRNLQLQFKSRLSLPLFTGGKVEGEQGAPIHVVLIDANCGSVVTSGPESSVKLDVVVLEGDFNNEDDEDWTQDDFESHVVKEREGKRPLLTGDLQVTLKEGVGTLGELTFTDNSSWIRSRKFRLGLKVASGFCESIRIREAKTVAFTVKDHRGELYKKHYPPALTDEVWRLEKIGKDGSFHKKLNNAGIVSVEDFLRLVVKDQQKLRNILGSGMSNKMWEALLEHAKTCVLSGKLYVYYPEDARNVGVIFNNIYELRGLISGEQFYSADSLTETQKVYVDSLVKKAYENWEQVVDYDGKSLVNGNQNNRSITSENELRVESIDYGGGLDNQLQLPGLPVSVPSEQQMNSGMSVGGYNDTVVTRYPTQSLISNSSSRSHFDSSLYLSNDQLINNTHQTPNIRNDHGTVGLALGPPQSSTSGFHAGSSSIQPSTLNPFDDWSHNRDKGVDEFFSEEEIRLRSHEMLENEDMQHLLRLFSMGGHGSMSAEDGYAFPTFMPSPNIPNYDEDRSRPGRAVVGWLKIKAAMRWGFFIRKIAAEKRAQIEELDE* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00635 635 PANTHER OS02G0177800 PROTEIN 11 557 IPR012416 GO:0005516
Lapu3g00635 635 MobiDBLite consensus disorder prediction 14 28 - -
Lapu3g00635 635 Pfam Calmodulin binding protein-like N-terminal domain 92 239 IPR046831 -
Lapu3g00635 635 MobiDBLite consensus disorder prediction 1 28 - -
Lapu3g00635 635 Pfam Calmodulin binding protein central domain 252 317 IPR046830 -
Lapu3g00635 635 Pfam Calmodulin binding protein C-terminal domain 322 384 IPR046829 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00635 Lapu-Chr3 6607146 6615088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00635 1 630 Calmodulin-binding Proteins AT5G57580 67.707 0.0 854
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00635 - - gmx:100790087 1144.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00635 3 6607146 6615088 Lapu3g00635 3 6607146 6615088 ECH