Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00621 ATGGATACTGATGAGGAGTGCTCAATTGTTCTTGAATTACCTGAAAAGGATTCTTTCTTTGACAAAAAGAAGAAATTACTTCAAAGTAAGGGTTTTAGTCCCAAAGAACGGATATACCTCAGGAGCTCTTCAAAACCTGGCTGGATGAGTGCCACTGTGGAGGTGTTACTTCAGATTGCACGGATCATACAATTAAATGAGCTGGAGCTTTATTTTGCTGAAGATGATGTATGCGCGTCAATGGAATTTTACAGTCCCAGGAACGAGTTGGAGGCTCTCAATTCAATTGTTTTGCTCACTGACATATCACTTTCTGGCTGTTCACATCTCTATACAAATATCCTGCAAGGGTTACGCCAAACAATTCTTGATTTAATTTCTGATTTGGGGGACAAAAACAGTGTGAAGGGAGTAGTTGAAAAAGACCACAGTTGTGACCAAGAAGAACGCCTGATAGAATGGGGTGAAAGCAATGGTGTAAAGACACAGTTAAAAATAGCTGATATTGAAGGAGCTGGTCGAGGTGCAATAGCAAGGAAAGATCTAAAAGTTGGAGACATTGCTTTGGAAATTCCTGTGTCCATTATCATTTCTGAGGAGCTTGTGCACGAAACCGATATGTACGATGTCTTAAAAGAAATTGACGACATATCATCTGAGACAATATTGCTTTTGTGGAGTATGAAAGAAAAGTACAATAGTGATTCAAAATTCAAAATATATTTTGACACACTCCCAGAAAAATTTAATACAGGTTTGAGTTTCAGCATTGATGCAATTACAATTTTAGATGGAACCTTGCTGTTGGAAGAGATAATGCAAGCAAGACAGCATCTGCATGCTCAGTATGATGAGTTGTTCCCTGTTCTATGCAATACTTTTCCTGATATATTTCCACCAGAGCTGTACACGTGGGAGAAATTTTTATGGGCTTGTGAACTTTGGTACTCTAATAGCATGAAGATAATGTATTCCGATGGAAAGCTAAAAACATGCTTGATCCCTATCGCTGGCTTTCTTAATCATTCAATGTGCCCACATATTATGCACTATGGCCAAGTGGATCCTGCAAAAAATTCACTGAAATTTTGTCTATCAAGACCATGCAGATCTGGAGAAGAATGCTGCTTAAGCTACGGCAACTTCTCCAGCTCTCATCTAATTACCTTTTATGGTTTTTTACCACAAGGAGACAACCCGTATGATGTTATTCCGTTAGACATTGGCGGTACCGACGATGATTCTAATGAGGATATACTCAGCTCCAACTGGACGAGCCACATGGTGCGTGGTACCTGGCTCTCCAGGAATCACAAGATATTCTACTATGGTCTTCCCTCTCCATTATTGGACCATCTTCGGAGATCTCGAAGTCCCATGCTGCGAACAAAGACCTTTTTGCAAGAAAGCTTGGAAAATGAGCTGGCAGTTCTTGAAAATCTCAAAGATATCTTCGATGACATGATGGAAAATATGGGCGAGATCGATCTGGATGACAGAGAAAACTGCTGTTGGGATGAAAAATTGGCTATGGATTTTAAAAATGCACAAAGACGAATTGCGTGTTCTGTTTCAACCTCGTGTCTCGCTGGTATGGATATGTTGAAGAGCGAACTATGCAAGTGCATGGCTGAGGACATCCGAGGCTAA 1650 0.403 MDTDEECSIVLELPEKDSFFDKKKKLLQSKGFSPKERIYLRSSSKPGWMSATVEVLLQIARIIQLNELELYFAEDDVCASMEFYSPRNELEALNSIVLLTDISLSGCSHLYTNILQGLRQTILDLISDLGDKNSVKGVVEKDHSCDQEERLIEWGESNGVKTQLKIADIEGAGRGAIARKDLKVGDIALEIPVSIIISEELVHETDMYDVLKEIDDISSETILLLWSMKEKYNSDSKFKIYFDTLPEKFNTGLSFSIDAITILDGTLLLEEIMQARQHLHAQYDELFPVLCNTFPDIFPPELYTWEKFLWACELWYSNSMKIMYSDGKLKTCLIPIAGFLNHSMCPHIMHYGQVDPAKNSLKFCLSRPCRSGEECCLSYGNFSSSHLITFYGFLPQGDNPYDVIPLDIGGTDDDSNEDILSSNWTSHMVRGTWLSRNHKIFYYGLPSPLLDHLRRSRSPMLRTKTFLQESLENELAVLENLKDIFDDMMENMGEIDLDDRENCCWDEKLAMDFKNAQRRIACSVSTSCLAGMDMLKSELCKCMAEDIRG* 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00621 549 Pfam SET domain 173 380 IPR001214 GO:0005515
Lapu3g00621 549 Gene3D set domain protein methyltransferase, domain 1 115 393 - -
Lapu3g00621 549 CDD SET_LSMT 164 394 - -
Lapu3g00621 549 FunFam SET domain-containing protein 4 141 - -
Lapu3g00621 549 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 140 491 - -
Lapu3g00621 549 FunFam Transcription factor, E2F and DP-related 146 394 - -
Lapu3g00621 549 SUPERFAMILY SET domain 148 401 IPR046341 -
Lapu3g00621 549 Gene3D - 2 114 IPR036464 -
Lapu3g00621 549 ProSiteProfiles SET domain profile. 162 380 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lapu3g00621 SET 2.2e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00621 K19199 - gmx:100778605 1004.59
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00621 3 6464638 6473060 Lapu3g00621 3 6464638 6473060 ECH