Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00600 ATGGAAGGCCAAGTAGCTAAACGGAGACGTGTATACTCTGTGGAACCAAACCAAATATTGCAATCTATATTTACTAGGAATTATTTGAACCATTTAGTTCCAGCGTTGGTGAAGATAAAGGAAAAGAGCTCTATAGAAGATAGCAGCAATTGTGACATTAACAATGCTGTCAGGTATGAGGTGGACATGGCAATGGTGTTGTCAGCACAAGGTTTTGCATGGAGTAACGGCCTTAAAGTCAAGCTTCAAAAGGATCATGTTCATGTCAATGCAGCTAAAAGCCCTACGTTTCTTGAAAATGAGGCTGGTGAAGGTTCATCAAGGGCTTGTGACAAAAATGAGGTTGTCCCTATGGAATTCTCTTCAAACCCTAGCTCGAAGTCTCAGGTTGAGGCTTTAGGGAGTAAGTCTAAGTGCAAGAACGTGTCAGAAATGAAAAGGGATTTGGCCAGAGAAGATGATAATGAAGATGAGGACATCAACAAGCAGTGGAAGAGGCTGAGAAGGTTGATACCTGGAGGAGAAGAGATGTGTGATGAACATATGGCTGACGAGCTTGAGAGTTACATAAGCTGTTTGCAAATGCAGGTGAACGCTCTTGAGTTTCTCCTGCCACAGACGCGTTAA 627 0.4274 MEGQVAKRRRVYSVEPNQILQSIFTRNYLNHLVPALVKIKEKSSIEDSSNCDINNAVRYEVDMAMVLSAQGFAWSNGLKVKLQKDHVHVNAAKSPTFLENEAGEGSSRACDKNEVVPMEFSSNPSSKSQVEALGSKSKCKNVSEMKRDLAREDDNEDEDINKQWKRLRRLIPGGEEMCDEHMADELESYISCLQMQVNALEFLLPQTR* 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00600 208 CDD bHLH_AtIBH1_like 151 204 IPR044549 GO:0006355
Lapu3g00600 208 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 23 203 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00600 Lapu-Chr3 6185884 6187128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00600 1 82 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30180 46.512 3.13e-15 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00600 - - gmx:100775329 299.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00600 3 6185884 6187128 Lapu9g00493 9 5517420 5518437 PCT