Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00594 ATGGCGGTGACCCTCAAAGCATGTTGCACCGTGAGGCCAATGGACCCAACATGGTGTGGACGCGTACCCTTATCTGAATGGGATCAAACAGGGAAAGTAACACACGTGCCCATACTCTACTTCTACCGTCCCCCAGAGAACTGGCTCACCCAAGACAACGCCATTGCTTCCACCTTGAAGGACTCATTAAGCCGAGTTCTGGTGCCGTTTTATCCACTTGCTGGTCGTTTGCATTGGATAAGCAAGGGTCGTTTAGAGCTTGATTGCAACGCCATGGGCATTCGATTCATCGAAGCTGAGTCCTCATCAACTTTAGAAGATTTCAGTGTTTTTTCACCTTCTTCTGAATACCACTACCTTGTCCCTACTGTCGACTACTACTCCCTCCCAATTCACGACTTGCCGTTGGTTCTGGTTCAGCTAACGAGGTTCAAGTGTGGTGGCATTTGTATTGGCGTAACATTTTCGCACGCGGTTATGGATGGACCAAGTGCATTGCACTTCATATGTGAGTGGGCAAGGCTTGCACGGGGCGAGCCTCTGCATACGGCGCCATTCCTTGACCGGAAAGTTTTGCGTGCTGGGGAGCCTCCTTTGGTGCCACTAACAGAATGTCACGTTCACTCGGAGTTCGATGACCCTCCCTTGTTGCTTGGCCAAACTGATAACAATGAGGAAAAGAAAAAGGAAACCACAATGACTATCCTTAAAATAAGCAAAACTCAAGTTGAAACATTGAAAAAGATAGCAAATGAGAGTTCGCATAGGCCTAGAAATGGTCGTGGTTATTCCCGTTATGAGAGCGTGGCCGGTCACATATGGAGAAGTGCATGCAAGGCAAGGGGGCACAAAAAGAACCAAGCAACTATGCTTACTGTTGTCGTTGACTCGAGGGGTCGCATGGAACCTCCTTTGCCAAAAGGGTACTTTGGGAATGCCACTTTGGACACTGTTGCGTGTAGTCTTGCGGGTGATCTGGTGTCAGAGCCTTTGGGGTATGCGGCGAGTAGAATAAGGGAGGCGATTGAGAGGGTGAGCGATGAGTACGTGAGGTCGGGGATTGAGTTTTTGAAGAATCAGGAGGATTTGAGAAGATTTCATCAAGATCTTCATGCAGAAGGGCGTGAGAAGGAGCCTTTCTATGGGAACCCCAATTTGTCAGTGGTTAGTTGGTCGACGTTGCCGATCTATGGCATTGATTTTGGGTGGGGGAAGGAGGTTTATATGACTCCAGCAACACATGACTTCGATGGAGATTTTGTGCTTCTTCCTGATCCTGATGGGAATGGATCTATGCTGGTTGTTTTAGGCCTGCAAGTGGTGCATATGGATGCATATAAGAAGCATTTTTACCAGGACATTGCATAA 1368 0.481 MAVTLKACCTVRPMDPTWCGRVPLSEWDQTGKVTHVPILYFYRPPENWLTQDNAIASTLKDSLSRVLVPFYPLAGRLHWISKGRLELDCNAMGIRFIEAESSSTLEDFSVFSPSSEYHYLVPTVDYYSLPIHDLPLVLVQLTRFKCGGICIGVTFSHAVMDGPSALHFICEWARLARGEPLHTAPFLDRKVLRAGEPPLVPLTECHVHSEFDDPPLLLGQTDNNEEKKKETTMTILKISKTQVETLKKIANESSHRPRNGRGYSRYESVAGHIWRSACKARGHKKNQATMLTVVVDSRGRMEPPLPKGYFGNATLDTVACSLAGDLVSEPLGYAASRIREAIERVSDEYVRSGIEFLKNQEDLRRFHQDLHAEGREKEPFYGNPNLSVVSWSTLPIYGIDFGWGKEVYMTPATHDFDGDFVLLPDPDGNGSMLVVLGLQVVHMDAYKKHFYQDIA* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00594 455 Gene3D - 1 212 IPR023213 -
Lapu3g00594 455 Pfam Transferase family 2 452 - -
Lapu3g00594 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 443 - -
Lapu3g00594 455 Gene3D - 219 453 IPR023213 -
Lapu3g00594 455 FunFam Tryptamine hydroxycinnamoyl transferase 219 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00594 Lapu-Chr3 6132284 6133651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00594 1 452 Monolignol Biosynthesis Gene Families AT5G48930 38.053 9.06e-107 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00594 K13065 - gmx:100777532 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00594 3 6132284 6133651 Lapu3g00594 3 6132284 6133651 ECH