Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00593 ATGTCAGTAACCTACAAAGCCTGTTACACCGTGAAGCCTATGGAGCCAACAAAGTGTGAACGTGTACCCTTATCTGAATGGGATCAAATAGGCATCATAACTCACGTTCCCGTAATCTATTTCTACCGTCACTCACAAAACTTTGATCTCTCCCTAAACTACACCACCATTGTTGCCACCTTGAAGGACTCATTAAGCCGAGTCCTCGTGCCGTTTTATCCTCTAGCTGGTCGTTTACACTGGATAAGCAATGGTCGTTTAGAGCTTGATTGCAACGCCATGGGGATTCAGTTCGTTGAAGCTCAGTCTTCATCAACTTTTGAAGATCTTGGTGACTTTTCACCCTCTTCAGGGTACCACTACCTTGTTCCTGATGTAGACTACACTCTCCCAATTCACGAGTTGCCCTTGGTTCTGGTTCAGTTAACCAAGTTCAAGTGTGGTGGCATTAGCATCAGCTTGACAATTTCTCATGCCGTTGCTGATGGACCAAGTGCCTTGCACTTCATTAGTGAGTGGGCGAGGCTTGCACGCGGCGAACCTCTGCAAACGGTGCCATTTTTTGACCGAAAAGTGTTTCGTGCTGGGGAACCTCCTTCGGTGCCTCTAACAAAGTGTCACATTCACAGGGAGTTTGATCACCCTCCGTTGTTGCTGGGGCAAACGAATAGCTCGGAGGAAAGGAAGAAGAAAACCACAGTGGCTATTCTCAAATTGAGCAAAGTTCAAGTTGAGATCCTGAGAAAGACAGCAAACGAGAGTTGGCATAGACCTAGGAACGGTCGTGCTTACACTCGTTACGAGAGTGTAACTGGTCACGTGTGGAGAAGTGCATGCAAGGCAAGGGGGCACAAAGAGGAGCAACCAACCGCGGTTGGTATTTGCGTTAACGCGAGGAGTCGCATGGAACCTCCTTTGCCAAAAGAGTATTTTGGAAATGCCACTTTGGATGTGGTTGCTTCTAGCCTCGCGGGTGATTTGATATCAAAGCCTTTGGGGTATGCGTCGAGCCTAATAAGAGAGGCCATTGAGAGGGCGAATGATGAGTACGTGAGATCGGGGATTGAGTTCTTGAAGAATCAGGAAGATTTGAGTAGGTTTCAGGATCTCCATGCAATAGGGAGTGAGGAAGGGTCTTTCTATGGGAACCCTAATCTTGGTGTGGTTAGTTGGTTGACGTTGCCCATCTATGGGGTTGATTTTGGGTGGGGGAAGGAGGTTTATATGGGTCCAGGAACACATGCTTTTGATGGAGATTCTTTGCTTCTTCCTGGTTCTGATGGGGATGGATCTTTGTTGCTTGCTTTATGTCTGCAAGTGGTGCATATGGATGCCTTTAAGAAGTTCTTTTATGAGGATATCGAGTGA 1368 0.4708 MSVTYKACYTVKPMEPTKCERVPLSEWDQIGIITHVPVIYFYRHSQNFDLSLNYTTIVATLKDSLSRVLVPFYPLAGRLHWISNGRLELDCNAMGIQFVEAQSSSTFEDLGDFSPSSGYHYLVPDVDYTLPIHELPLVLVQLTKFKCGGISISLTISHAVADGPSALHFISEWARLARGEPLQTVPFFDRKVFRAGEPPSVPLTKCHIHREFDHPPLLLGQTNSSEERKKKTTVAILKLSKVQVEILRKTANESWHRPRNGRAYTRYESVTGHVWRSACKARGHKEEQPTAVGICVNARSRMEPPLPKEYFGNATLDVVASSLAGDLISKPLGYASSLIREAIERANDEYVRSGIEFLKNQEDLSRFQDLHAIGSEEGSFYGNPNLGVVSWLTLPIYGVDFGWGKEVYMGPGTHAFDGDSLLLPGSDGDGSLLLALCLQVVHMDAFKKFFYEDIE* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00593 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 450 - -
Lapu3g00593 455 Gene3D - 221 453 IPR023213 -
Lapu3g00593 455 Gene3D - 1 213 IPR023213 -
Lapu3g00593 455 Pfam Transferase family 1 452 - -
Lapu3g00593 455 FunFam Tryptamine hydroxycinnamoyl transferase 220 451 - -
Lapu3g00593 455 SUPERFAMILY CoA-dependent acyltransferases 22 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00593 Lapu-Chr3 6128088 6129488 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00593 1 452 Monolignol Biosynthesis Gene Families AT5G48930 39.341 3.75e-112 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00593 K13065 - gmx:100777007 715.687