Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00583 ATGAGGTTGTTGGAGTTTGGGTGTATGTTGGTTGTTCTATCTGCATTTCTGGTTTCTGGGGATGCTGAGATTTACATAGTCACTGTTGAAGGTGAGCCTATCATAAGTTACACTGGAGGTACTGATGGGTTTGAAGCTACTGCAGTGGAATCTGATGAGAAGATTGATACCGAAAGTCTTTCTTCAATAAATGAATCGGTTACTTCTTATGCTCTCCATCTTGAGAAAAAACATGACATGCTGCTGGGGTTGCTGTTTAAGGAAGGGACATACCAGAAACTCTATAGCTATCGACATCTTATAAATGGGTTTTCTGTTCATATTTCACCGGAACAGGCAGAAATTCTAAGACGTGCTCCAGGAGTGAAATCTGTTGAGAGGGACTGGAAAGTGAGGAAACATACAACACATACCCCACAATTTTTAGGGCTTCCAACTGGGGTTTGGCCAACTGGAGGTGGCTTTGATAGGGCTGGAGAAGACATTGTCATTGGATTTGTGGACTCAGGAATCTATCCTCATCACCCAAGTTTTGCAACTCATAATGGTGAGCCATATGGGCCTGTTCCAAAGTATAGAGGAAAATGTGAAGCTGATCCAGATACTAAAAGAAGTTTCTGCAATGGGAAGATTGTTGGAGCACAACACTTTGCTCATGCTGCAATAGCTGCTGGGGCGTTTAACCCTACTATTGACTTTGCGTCTCCTCTAGATGGGGATGGGCATGGAAGTCATACTGCCTCCATCGCAGCTGGAAATAATGGAATTCCTGTGAGAATGTATGGCCATGAATTTGGGAGAGCCAGTGGGATGGCTCCTCGTGCCAGGATTGCTGTGTACAAGGCACTCTATAGACTGTTTGGGGGGTATGTTGCAGATGTAGTTGCTGCAATTGATCAGGCTGTATATGATGGGGTGGATATACTCAGCCTTTCAGTTGGACCCGACAGTCCTCCAGCAGCCACCAGAACTACCTTTTTGAACCCTTTTGATGCTACACTTCTTGGAGCTGTGAAAGCTGGTGTATTTGTTGCACAGGCTGCTGGAAACGGTGGTCCTTTTCCGAAGACACTTGTTTCTTATAGTCCGTGGATAGCATCGGTAGCAGCTGCAATTGATGATCGTAGATATAAAAACCATTTGATCCTTGGAAATGGAAAAACCTTAGCTGGAATTGGGTTATCACCTTCCACACATTTCAACGAAACATACAAATTGGTTGCTGCAAATGATGTGTTGCTAGATTCTTCAGTTATGAAGTACAGCCCCACAGATTGCCAGAGACCAGAACTTTTGAACAAGAACTTGATAAAGGGAAATATTCTTCTCTGTGGTTATTCCTTCAATTTTGTTGTTGGCTCTGCATCAATCAAGAAAGTCTCGGAAACAGCAAAGGCCCTTGGTGCAGTTGGGTTTGTTCTTTGTGTCGAAAATGTTTCCCCGGGAACAAAATTTGATCCAGTCCCTGTTGGTCTTCCTGGGATTCTCATCAAAGATGTCAGCTATTCAAAGGAACTTATAGATTATTATAATATCACTACACCAAGAGATTGGACTGGACGGGTAAAGAGGTTTGAAGGTACAGGTAAAATCGGTGATGGTTTGATGCCTATCCTGCATAAATCTGCACCACAGGTGGCAATATTCTCTGCTCGAGGACCAAATATAAAGGATTTCAGCTTCCAAGAGGCAGATCTTCTTAAACCAGATATATTAGCTCCTGGTTCATTGATTTGGGCTGCTTGGTGTCCAAATGGAACTGATGAGCCAAATTATGTTGGTGATGGGTTTGCCATGATATCTGGAACCAGCATGTCTGCTCCACATATAGCTGGAATAGCTGCTCTTATAAAGCAGAAGCATCCTCATTGGAGCCCTGCTGCCATTAAATCAGCCTTGATGACAACATCAACAACTCTAGACAGAGCAGGGAATCCTCTTCTAGCCCAGCAAACATCTGAATCAGAAGCTATGAAGTTGGTCAAAGCTACTCCTTTTGATTATGGGAGTGGACATGTTGATCCAACAGCTGCCTTGGACCCTGGACTAATCTTTGATGCAGGATACAACGATTACCTAGGCTTCTTGTGCACAACACCGGGCATTGACGTTCATGAGATAAGGAACTACACTCACACACCATGTAACACTACCATGGGCAAGCCATCAAATTTAAACACACCATCTATCACAATTTCCCATCTTGTGAGAACTCAAGTTGTCACACGCACGGTCACAAATGTCGCTGAAGAAGAAACCTATGTGATCACAGCCAGAATGGAGCCGGCTGTTGCCATTGAAGTCAACCCTCCGGCAATGACTATCAAAGCAGGCGCATCACGCCAATTTTCGGTGACACTGTCAGTGCGTTCAGTGACAGGAAGTTACAGTTTTGGGGAGGTTTTGATGAAAGGGAGCAGAGGGCACAAGGTGAGGATTCCTGTTCTGGCCAATGGATACAGAAGATAG 2469 0.4423 MRLLEFGCMLVVLSAFLVSGDAEIYIVTVEGEPIISYTGGTDGFEATAVESDEKIDTESLSSINESVTSYALHLEKKHDMLLGLLFKEGTYQKLYSYRHLINGFSVHISPEQAEILRRAPGVKSVERDWKVRKHTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFVDSGIYPHHPSFATHNGEPYGPVPKYRGKCEADPDTKRSFCNGKIVGAQHFAHAAIAAGAFNPTIDFASPLDGDGHGSHTASIAAGNNGIPVRMYGHEFGRASGMAPRARIAVYKALYRLFGGYVADVVAAIDQAVYDGVDILSLSVGPDSPPAATRTTFLNPFDATLLGAVKAGVFVAQAAGNGGPFPKTLVSYSPWIASVAAAIDDRRYKNHLILGNGKTLAGIGLSPSTHFNETYKLVAANDVLLDSSVMKYSPTDCQRPELLNKNLIKGNILLCGYSFNFVVGSASIKKVSETAKALGAVGFVLCVENVSPGTKFDPVPVGLPGILIKDVSYSKELIDYYNITTPRDWTGRVKRFEGTGKIGDGLMPILHKSAPQVAIFSARGPNIKDFSFQEADLLKPDILAPGSLIWAAWCPNGTDEPNYVGDGFAMISGTSMSAPHIAGIAALIKQKHPHWSPAAIKSALMTTSTTLDRAGNPLLAQQTSESEAMKLVKATPFDYGSGHVDPTAALDPGLIFDAGYNDYLGFLCTTPGIDVHEIRNYTHTPCNTTMGKPSNLNTPSITISHLVRTQVVTRTVTNVAEEETYVITARMEPAVAIEVNPPAMTIKAGASRQFSVTLSVRSVTGSYSFGEVLMKGSRGHKVRIPVLANGYRR* 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00583 822 CDD Peptidases_S8_3 131 638 IPR034197 -
Lapu3g00583 822 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 164 175 IPR023827 -
Lapu3g00583 822 Pfam Fibronectin type-III domain 724 816 IPR041469 -
Lapu3g00583 822 CDD PA_subtilisin_like 381 519 - -
Lapu3g00583 822 ProSitePatterns Serine proteases, subtilase family, serine active site. 602 612 IPR023828 -
Lapu3g00583 822 FunFam Subtilisin-like protease SBT1.5 161 382 - -
Lapu3g00583 822 Pfam Subtilase family 159 643 IPR000209 GO:0006508|GO:0008236
Lapu3g00583 822 PRINTS Subtilisin serine protease family (S8) signature 238 251 IPR015500 -
Lapu3g00583 822 PRINTS Subtilisin serine protease family (S8) signature 159 178 IPR015500 -
Lapu3g00583 822 PRINTS Subtilisin serine protease family (S8) signature 601 617 IPR015500 -
Lapu3g00583 822 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 134 IPR037045 -
Lapu3g00583 822 Gene3D Peptidase S8/S53 domain 161 692 IPR036852 GO:0004252|GO:0006508
Lapu3g00583 822 Pfam Peptidase inhibitor I9 25 133 IPR010259 -
Lapu3g00583 822 SUPERFAMILY Subtilisin-like 134 683 IPR036852 GO:0004252|GO:0006508
Lapu3g00583 822 Gene3D - 696 819 - -
Lapu3g00583 822 SUPERFAMILY Protease propeptides/inhibitors 91 132 - -
Lapu3g00583 822 ProSiteProfiles Serine proteases, subtilase domain profile. 128 679 - -
Lapu3g00583 822 Gene3D - 374 539 - -
Lapu3g00583 822 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 88 815 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00583 Lapu-Chr3 5977405 6003785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00583 4 822 Subtilisin-like Serine Gene Family AT4G30020 79.659 0.0 1351