Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu3g00558 | TGTTTGATTATCTTATTTGTGCAGTCAGAGGTGAATTTCTTAGGGAGCCTTTCTCATCCCAACCTTGTGAAGTTGTTGGGATTTCGACGAGAGGAAAAAGAGCTGTTCCTGGTTTTCAAATTCATGCGTCGTGGTTCCTTGGATAACCACCTATTTGGAAGAGGTGCAAATGTTCGACCCCTTTCTTGGGATACAAGGCTAAAGGTTATGATTGGAGTAGCTAAGGGACTGAATTTCCTTCATTCCATGGAAATGAAAATTGTACATAGAGATATTAAACCCTCAAATATACTCCTTGACGAGACATATACGGCAAAGTTATCAGACTTTGGCTTAGCCAAGACTTTTACTTCGCTTGAT | 360 | 0.4028 | CLIILFVQSEVNFLGSLSHPNLVKLLGFRREEKELFLVFKFMRRGSLDNHLFGRGANVRPLSWDTRLKVMIGVAKGLNFLHSMEMKIVHRDIKPSNILLDETYTAKLSDFGLAKTFTSLD | 120 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu3g00558 | 120 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 87 | 99 | IPR008271 | GO:0004672|GO:0006468 | |
Lapu3g00558 | 120 | FunFam | Os07g0541700 protein | 42 | 120 | - | - | |
Lapu3g00558 | 120 | SMART | serkin_6 | 2 | 120 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu3g00558 | 120 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 8 | 117 | - | - | |
Lapu3g00558 | 120 | Pfam | Protein kinase domain | 7 | 117 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu3g00558 | 120 | Gene3D | Transferase(Phosphotransferase) domain 1 | 5 | 120 | - | - | |
Lapu3g00558 | 120 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 118 | IPR011009 | - | |
Lapu3g00558 | 120 | ProSiteProfiles | Protein kinase domain profile. | 1 | 120 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu3g00558 | Lapu-Chr3 | 5661577 | 5662162 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu3g00558 | 8 | 120 | Receptor kinase-like Gene Family | AT1G30570 | 49.123 | 4.01e-31 | 114 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Lapu3g00558 | Pkinase | 6e-27 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu3g00558 | - | - | gmx:100813304 | 191.045 |