Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00519 ATGAAGAAGTCGTGTAGTGTGATAGGTTATTACCTTTGTCTAATCAATGTGTTCATGTTGCTTTTGGTAGTAAGGTCTCAACTGACTACAGATTTCTACAAGTCATCATGTCCTAACGTTTCCAAAATAGTAAGGAGAGAGGTTCAAAAAGCTCTCATGAATGAGATGCGAATGGGTGCTTCTTTGCTTCGCCTTCACTTTCATGATTGCTTTGTCAACGGGTGTGATGGATCAATTCTACTAGATGGTGGAGATGATGTAGAGAAGTCTGCTATTCCTAATCTGAACTCTGTTAGAGGATATGAGGTTGTAGATACAATCAAAAGTTCAGTGGAGAGTGCATGCAGTGGGGTTGTCTCCTGTGCTGATATATTAGCCATCGCTGCCAGAGATTCAGTTTTCCTATTTGCTGATGCAGGCCTTAATCTCACAGATGTTGTTTCTTTATCAGGTGCCCATACCATTGGCCGAGCACGGTGTACATTTTTTAGCAATAGATTGTCCAACTTCTCAGGAACTGGTGCACCAGACACTACACTAGACACTGCCATGCTCTCTGACCTGCAAAGTTTGTGTCAAAATGGAGATGGAAACGCAACTGCAGTTCTCGATAGGAACTCAACGGATCTATTTGACAATCACTACTTCAAGAACTTGGTCAGTGGAAAAGGGCTTCTCAGTTCTGATCAGATTCTATTTTCTGGTGATGCGGCTAATTCAACCACTAAACCTTTAGTGGAAAGCTATATCAACGATAGTGGCCTCTTCTTCGGAGACTTTGTCAATTCTATGATCAATATGGGGAACATAAATCCAAAAACTGGGTCTGATGGAGAGATTAGGAAGAACTGCAGAGTCATAAATTCGTAG 870 0.4161 MKKSCSVIGYYLCLINVFMLLLVVRSQLTTDFYKSSCPNVSKIVRREVQKALMNEMRMGASLLRLHFHDCFVNGCDGSILLDGGDDVEKSAIPNLNSVRGYEVVDTIKSSVESACSGVVSCADILAIAARDSVFLFADAGLNLTDVVSLSGAHTIGRARCTFFSNRLSNFSGTGAPDTTLDTAMLSDLQSLCQNGDGNATAVLDRNSTDLFDNHYFKNLVSGKGLLSSDQILFSGDAANSTTKPLVESYINDSGLFFGDFVNSMINMGNINPKTGSDGEIRKNCRVINS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00519 289 ProSitePatterns Peroxidases proximal heme-ligand signature. 145 155 IPR019793 -
Lapu3g00519 289 Gene3D - 269 288 - -
Lapu3g00519 289 Gene3D - 31 135 - -
Lapu3g00519 289 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 PRINTS Haem peroxidase superfamily signature 145 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Lapu3g00519 289 Pfam Peroxidase 44 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 Pfam Peroxidase 136 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 Gene3D Peroxidase, domain 2 136 268 - -
Lapu3g00519 289 SUPERFAMILY Heme-dependent peroxidases 27 288 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 ProSiteProfiles Plant heme peroxidase family profile. 27 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 PANTHER PEROXIDASE 72-RELATED 19 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 CDD secretory_peroxidase 27 287 IPR033905 GO:0004601|GO:0042744
Lapu3g00519 289 PRINTS Plant peroxidase signature 218 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 PRINTS Plant peroxidase signature 262 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00519 289 FunFam Peroxidase 127 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00519 Lapu-Chr3 5299809 5301717 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00519 1 288 Peroxidase AT5G19890 54.381 2.36e-116 336
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00519 K00430 - gmx:100817622 481.87