Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00503 ATGCTTACGTGCATAGCTCGTCCGAAGAAACCTGATGAATCGGATCCGAACAACGCGACAAGCGCCGCTAAATCGCAAGCCATCAAATCCCTTACTTCTCAGATAAGGGATATGGCGTTGAAGGCTTCGGGAGCGTACAAGCATTGCGCTCCGTGCACGGGGCCTGCGGCGCAGGGACGAGTGCGGAGCAACACCGAGTCGGATGCGGACTCCGACCGCTTCCGTTGGTCGTACCGGCGAACAGGGAGTTCGAGCTCGACGACGACTCGGACGTGGGGGAAGGAGATGGAGGCGCGGCTGAAGGGGATATCGAGCGGGGAGGGGACGCCGAACTCCGCAAGCGGACGGCGGGCGGAGCCGTTGGTGCTGTTCGTTGAAGAGAACGAGCCGAAGGAGTGGGTAGCGCAGGTGGAGCCTGGCGTTTTGATTACGTTCGTGTCGTTGCCACGTGGCGGTAACGATCTCAAACGCATACGGTTCAGTCGAGAGATGTTCAATAAATGGCAAGCACAAAGGTGGTGGGCAGACAACTACGACAAAGTTATGGAACTTTATAATGTTCAAAGGTTTAGCCGCCAAGCATTCCCTCTTCCGACGCCACCAAGATCTGAAGATGAGAGCACAAAGCTTGAATCAGCAGAAGCCAGCCCTGTAACACCTCCACTGACCAGGGAACGGTTACCTCGTAATATTTACCGTCCAACAGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATTTCTACGACTCCAATGGTTTGAACTCCACCCCAAAAGTGTCCACTATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGTTCATCCAGAGAGGCTGATCGCTCGGGTGATTTATCAATCAGCAATGCTAGTGATTTGGAGACTGAGTGGGTTGAACAGGATGAACCTGGGGTTTACATTACAATCAGGGCATTGCCAGGTGGCGCAAGGGAGCTCAAACGAGTCAGGTTCAGCCGAGAAAAATTTGGAGAAATGCACGCTAGATTATGGTGGGAGGAGAACCGTGCCAGAATACATGAACAGTACTTGTGA 1098 0.5282 MLTCIARPKKPDESDPNNATSAAKSQAIKSLTSQIRDMALKASGAYKHCAPCTGPAAQGRVRSNTESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPLVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKWQAQRWWADNYDKVMELYNVQRFSRQAFPLPTPPRSEDESTKLESAEASPVTPPLTRERLPRNIYRPTGMGMGYSSSDSFDHQSMQSRHFYDSNGLNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSISNASDLETEWVEQDEPGVYITIRALPGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00503 365 MobiDBLite consensus disorder prediction 196 226 - -
Lapu3g00503 365 Pfam Transcription factor BRX N-terminal domain 20 52 IPR027988 -
Lapu3g00503 365 MobiDBLite consensus disorder prediction 49 70 - -
Lapu3g00503 365 ProSiteProfiles BRX domain profile. 310 365 IPR013591 -
Lapu3g00503 365 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 365 IPR044532 -
Lapu3g00503 365 MobiDBLite consensus disorder prediction 1 27 - -
Lapu3g00503 365 Pfam Transcription factor regulating root and shoot growth via Pin3 309 364 IPR013591 -
Lapu3g00503 365 Pfam Transcription factor regulating root and shoot growth via Pin3 131 185 IPR013591 -
Lapu3g00503 365 ProSiteProfiles BRX domain profile. 131 186 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00503 Lapu-Chr3 5137807 5143751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00503 1 365 Major Intrinsic Protein MIP AT1G31880 44.216 1.04e-90 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00503 - - gmx:100794109 677.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00503 3 5137807 5143751 Lapu3g00503 3 5137807 5143751 ECH
Lapu3g00503 3 5137807 5143751 Lapu9g00406 9 4296284 4306484 PCT