Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00485 ATGCTGTTTTCTGTTAGGATTACGGATTCTGATTTCTTGAACCACAAGAAGAAGAAAGAAGTTTCGGTGCAACTTTCGACTCTAACGCCACCTGGTTCCAGACTGGAAACCGTGAGGTTCTCCAATCTCAACTTTGGTCGCTGGCAACCTTCGCCTCAAGAATTGAATCCACACGAGAGTCTTGAGTTTGGCAATTTCATTGCACGAGAGGCCCTTTTGAACGAAGAGTATTGGACAGCAGCGTGGCTAAGGGCAGAATATGAGTCGGAAAGTCGAACAGAACGATTTAGCTATTATAAGAAGAGGGTATATGCTAATGAGGAATATGGTAAGATAAAGAAACGGTGCAAGGAGCCACCACACGGCCACAGCTCCACATGCATAATCACGGTGATGAAGCAGCAGAAGGATGTAAAACGCTTGGTAGTAAGAAGTGTTGTAGGAACCCTTGATTTGAATATACGATATTTGCTGCTCGGGGAGACCTTTCCTGGGGAACGGGTGGATGCTCCCCGTTTTTGTAAAGTCAACCGAACACCATCAAGCAGATATGGTTATATTGCAAACTTGTGTGTTGCTAAATTACATCGCCGCAAGGGTATTGCAAGCAACATGTTGCGTTTTACTGAGGAATTTGCAAAATCTAGTGGTAATATGAACATTGATGTTTGGAGTAAGTTTTACAACTAA 690 0.4348 MLFSVRITDSDFLNHKKKKEVSVQLSTLTPPGSRLETVRFSNLNFGRWQPSPQELNPHESLEFGNFIAREALLNEEYWTAAWLRAEYESESRTERFSYYKKRVYANEEYGKIKKRCKEPPHGHSSTCIITVMKQQKDVKRLVVRSVVGTLDLNIRYLLLGETFPGERVDAPRFCKVNRTPSSRYGYIANLCVAKLHRRKGIASNMLRFTEEFAKSSGNMNIDVWSKFYN* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00485 229 Gene3D - 66 229 - -
Lapu3g00485 229 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 176 219 IPR016181 -
Lapu3g00485 229 Pfam Acetyltransferase (GNAT) family 146 219 IPR000182 GO:0016747
Lapu3g00485 229 CDD NAT_SF 178 224 - -
Lapu3g00485 229 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 13 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00485 Lapu-Chr3 4986083 4987402 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu3g00485 Acetyltransf_1 3.9e-06 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00485 - - pvu:PHAVU_003G131100g 315.464