Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu3g00478 | ATGACAATCGCATGGGGATCGATCTTCTCTAGTTGTTTCAAGAGTGAGTCTGTCTCTCCTTCTCCCAAGCCCACCAAAGTGGTGGCTACAAAGGGTGGCTCTTCTTCCAACAGGGTCTCCATTATGGACTTGAGTTTTCCTGGCTCAACGCTTTCAGAGGATCTCTCCGTTTCTCTTGTGGGGTCTAACCTGCACGTTTTTTCACTCGCCGAGCTCAAGATCATCACACAGAGTTTCTCTTCGAGTAACTTTTTAGGAGAAGGAGGTTTTGGACCCGTGCATAAGGGCTTCATTGATGACAAGCTTAGGCCTGGCCTCGAGGCTCAACCGGTGGCCGTCAAGCTCTTGGACTTGGACGGTTCTCAGGGCCACAAAGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTAAGGCATCAACATCTGGTGAAGTTGATTGGATATTGCTGTGAAGAAGAACACAGGCTTCTGGTATATGAATATTTACCACGAGGCAGCTTAGAGAATCAACTATTTAGAAGATTTACGGCATCGTTACCATGGTCAACAAGAATGAAAATTGCAGCGGGAGCTGCAAAGGGTCTAGCCTTTCTACATGAAGCAAAAAAACCAGTCATCTATAGAGATTTCAAAGCTTCAAACATATTGTTAGACTCTGATTATAATGCAAAGCTTTCTGATTTTGGCTTGGCAAAAGATGGTCCAGAAGGAGATGACACACACGTTTCAACTAGAGTCATGGGCACACAAGGGTATGCAGCCCCAGAATACATCATGACAGGACACTTGACAGCAATGAGTGATGTATACAGTTTTGGAGTTGTTCTCTTGGAGATTCTAACAGGAAGAAGATCAGTGGACAAAGGGCGCCCGCCAAGAGAGCAAAATCTCGTGGAATGGGCCAGACCTGTTTTGAATGATTCCCGGAAACTTAGCCGAATAATGGATCCAAGACTTGAGGGACAGTATTCTGAGGTAGGGGCAAGAAAAGCAGCTGCATTGGCTTACCAATGTCTCAGCCACAGGCCAAGAAGTAGACCCTTGATGAGCACTGTGGTTAGTGTTCTTGAGCCTCTCAAGGACTTTGATGATGTTCCAATTGGACCCTTTGTTTACACTGTTCCAACTGATCACAATGAGGTGGCAAAAGAGGCTGAAACACCCAAGGAGAGGAAGAGGGAAAATGGTCACCATCATCACAGGAATCATCATCACAATAATGGTCATAAACATCATGATCACGATGAGGCCAATAAAGATGCAAATGGTCAGCATCACCACCGAAGTCATCGCCACAATGGCCATAGGCATCATCCACTTAAATCGCCCAAGACACCAATTTCATCATCCGAGTCACAGAATAATGAACACCGAAATGGTAGAAGAAGTGGGTCAAACTCACCTGACACCTCCACTGCATCAGAAGCACAAGGAAGCATGGGTTAG | 1446 | 0.4578 | MTIAWGSIFSSCFKSESVSPSPKPTKVVATKGGSSSNRVSIMDLSFPGSTLSEDLSVSLVGSNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRPGLEAQPVAVKLLDLDGSQGHKEWLTEVVFLGQLRHQHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRFTASLPWSTRMKIAAGAAKGLAFLHEAKKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLEILTGRRSVDKGRPPREQNLVEWARPVLNDSRKLSRIMDPRLEGQYSEVGARKAAALAYQCLSHRPRSRPLMSTVVSVLEPLKDFDDVPIGPFVYTVPTDHNEVAKEAETPKERKRENGHHHHRNHHHNNGHKHHDHDEANKDANGQHHHRSHRHNGHRHHPLKSPKTPISSSESQNNEHRNGRRSGSNSPDTSTASEAQGSMG* | 482 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu3g00478 | 481 | MobiDBLite | consensus disorder prediction | 379 | 393 | - | - | |
Lapu3g00478 | 481 | ProSiteProfiles | Protein kinase domain profile. | 79 | 371 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Lapu3g00478 | 481 | CDD | STKc_IRAK | 85 | 359 | - | - | |
Lapu3g00478 | 481 | Gene3D | Phosphorylase Kinase; domain 1 | 48 | 161 | - | - | |
Lapu3g00478 | 481 | PANTHER | OS01G0588500 PROTEIN-RELATED | 41 | 360 | - | - | |
Lapu3g00478 | 481 | FunFam | Probable serine/threonine-protein kinase PBL8 | 162 | 371 | - | - | |
Lapu3g00478 | 481 | MobiDBLite | consensus disorder prediction | 443 | 481 | - | - | |
Lapu3g00478 | 481 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 357 | IPR011009 | - | |
Lapu3g00478 | 481 | MobiDBLite | consensus disorder prediction | 409 | 423 | - | - | |
Lapu3g00478 | 481 | FunFam | Serine/threonine-protein kinase BIK1 | 48 | 161 | - | - | |
Lapu3g00478 | 481 | MobiDBLite | consensus disorder prediction | 371 | 481 | - | - | |
Lapu3g00478 | 481 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 205 | 217 | IPR008271 | GO:0004672|GO:0006468 | |
Lapu3g00478 | 481 | Pfam | Protein tyrosine and serine/threonine kinase | 83 | 355 | IPR001245 | GO:0004672|GO:0006468 | |
Lapu3g00478 | 481 | MobiDBLite | consensus disorder prediction | 424 | 442 | - | - | |
Lapu3g00478 | 481 | Gene3D | Transferase(Phosphotransferase) domain 1 | 162 | 365 | - | - | |
Lapu3g00478 | 481 | MobiDBLite | consensus disorder prediction | 394 | 408 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu3g00478 | Lapu-Chr3 | 4925650 | 4928249 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu3g00478 | 65 | 356 | Glycoside Hydrolase | AT3G07070 | 54.237 | 2.65e-103 | 313 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Lapu3g00478 | PK_Tyr_Ser-Thr | 3.6e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu3g00478 | - | - | gmx:100799411 | 828.165 |