Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00471 ATGATGGCGAATCATGATGATTTTACGTATGATGTTTTCATGAGTTTCAAGGGCGAAAACGGGACTCGCTACGCATTCACCGATCATCTCTACCGAGCTTTGCTACGTCACGGAATCAACGCCTTCAGAGACGATCAGAGTCTCCGGAGCGGGGACGAGATCCGTCCTTCTCTTCTTCAGGCAATCGAAGGTTCCAGAATCTCTTTGGTCGTGCTCTGTCAAAACTATGCGTCTTCCTCTTGGTGCCTTGACGAACTGGCCAAGATCATTCACTGTTACGAAAACAAAGCAAAACATGTCGTTGCAATTTTTTATTTGGTGGAGCCTTCGGATGTACGGTACCAGAAAAACAGTTATGCAACTGCCATGAGTAAACATGAAAGCAGATATGGAAAAGAGTCCGAGAAGGTTAAAGCATGGCGATCAGCTTTGTCCAGAGTTTGCGATCTAACCGGAATACACTACAGGAACCATATGTATGAAACTGAGGTTATTGAGAAGATTGTGAAAGACACCTCAGCTAAACTACCTCCCATGCCTTTGCAAATCAAGCACCTAGTTGGACTCGATTCTCGTTTTGAACGGCTGAAATCTGTAATAGATATTGAATGTAATGATTCCGTTTGCATGCTGGGGATCTATGGGGTTGGCGGAATTGGCAAAACCACATTTGCTGTTGATCTGTATAACAAGATCAGGCTTCATTTTGAAGCTGCAAGTTTTCTGGCTAATGTCAGAGAAAAATCAAATAAAAGCATCAAAGGCCTGGAAGATCTCCAAAGGACACTTCTGTCAGAGATGGGTGAAGAGACAGAAACCATTATTGGCAGTACATTTAAAGGAAGTTCTGATATAAAGTGCAGGCTTGGACATAAAAGAGTTCTTCTGGTTGTGGATGATGTTGATTCTGTAAAACAATTGGAAGCATTAGCTGGAGGATATGATTGGTTTGGTCCTGGTAGCATAATCATTATAGCAACAAGAGATAAAGATGTTCTACTTAAGCATGATGTTGAAATTAAAAGATATGAAATGGAGGAGCTAAATTATCATGAATCCCTTGAACTCTTTTGTTGGTATGCCTTTAATAGGAGCAGACCTGCAGAAAACTTTGCAAGCATCTCCACTCGTGCAGTAAGATATGCAAAGGGTATCCCGTTGGCATTAAGAGTAATAGGCTCCAATTTGAAGGGTAGGGATCCTGAACAATGGGAGATTGAATTACAGAAATACAGGAAGGTTCCAGATGCGGAGATTCAAGGTGTACTGGAAATAAGCTACACAAGCCTGTCTAACTTGGACCAGAAAATTTTCCTGGACATTGCATGTTTCTTCAAAGGGGAAAGGTGGGATTATGTTAAAAGGATACTAGATGCTTGTGATTTCAACCCGGATATACAAGTATTTGTTAGTAAATGTCTCATAACAGTTGATGAAAACGGTTGCTTGGAAATGCATGATCTAATACAAGACATTGGTAGAGAGATTGTTCGGAAGGAATCGCCATCAAACCCTGGTTACCGAAGCAGATTATGGTCTCATAAAGAAGTTCGTGAAGTACTTAAAGAAAACTCAGGAAGTGATACAGTTGAAGGAATAATGCTTCATCCCCCAAAACAAGAAAAACTTGTTCATTGGACTATGACAGCCTTCAAGAAGATGAAGAACCTCAGAATTTTAATTGTTCGCAATACAATATTTTCGTCTGGTCCTAGTTACCTGCCAAATAGTTTACGGCTAATCGATTGGAAGGGGTACCCATCAAAGTCTTTTCCGCCGGACTTTTATCCCCACAGAATTGTTGACTTCAAGTTACCTCATAGTTCTCTGATATTGAAAAAACCGTTTCAGAGATTTGAGGATTTGACATTCATCAATCTTTCCCATTGTCAATCCATAACTCAAATTCCTGACCTGTCTGGAGCTAAAAGCTTGAAGGTATTTACACTTGATAAATGCTATAAACTGGTAAGGTTCGATAAATCCATTGGGTTTATGCCTAACCTTGTCTATTTAAGTGCTTCAGAGTGCACTATGCTCACAAGTTTTGTGCCAAAGATATATTTGCCCTCTCTCGAAGTGCTTTCATTTAACTTTTGCAGAAGACTTGAACACTTCCCACATGTAATGCAAAAAATGGATAAGCCGTTAAAGATATACATGATGAATACTGCCATTAAGGAGATTCCCAAATCCATTGGTAACCTTACTGGACTTGAGCTTATAGACATGTCAGTTTGCAAAGCGCTTAAAAATCTGCCAAGTAGCTTCTTTTTGCTTCCAAAACTTGTCACTTTAAAAGTTGATGAATGCTCTCAACTTGGAGAATCATTTCAGAGGTTCCAAGAGAGCCGCCATTCAGTGGCAAACGGCAGTCCAAATTTAGTGACACTTCATTTTTGTGACACTAATCTATCATATGAAGATCTTTGTGCCATTCTTGAAATTTTTCCAAAATTGGAAGACTTAAAGATATCGCACAACGGATTGGTAGCCCTACCAAACAGCATCACAGGATCTTCTCACTTGAAAAGTCTTGATGTGAGTTTCTGCAGGAATCTTAAGGAAATTCCAGAACTTCCCTTAAGTATTCAGAAAGTAGATGCAAGACACTGTCAGTCCTTAACTTCAGAGGCATCAAGCATGCTGTGGTCTAAGGTCTCAGAAGAGATCCAAAGAATACAAGTTGTGATGCCGATGCTGAAAAGGGAAATACCTGAATGGTTTCACTGCATTGGCACTGAAGAGATTCCACATTTCTGGGTTCGCAGAAAGTTTCCCGTCGTTGCTTTAGCATTAGTTTTCCAGGAAACGAAAGAGACACTGTCTGATTTTGAAGATGCTTTCCAATCAGCTATACGATCGTTCACTGGATTTGTGAACTGGCACACTGTTAGCCTCCACTTGTTTATTGACGGACGAGAAATTTGTGGTAGAGATTACCACTATTTCAACGTTGGAGAAGATCATGTATTATTTTGTGATCTGCGAGTCTTGTTCAGGGATGAAGAGTGGCAGGGCCTCGACGCAAGTCTTGGAGATGATTGGAAGGCCATTCAGGTTCAATACGGATCAGACTTGATTCTGAGTCATTGGGGAGTTAATGTGTACGAGCAAGAAACAAACATGGATGATATCCAGTTCTGGTTTCCCCCTCCCAGCTCCACTAGGAACTACTTGCCATCATCACTTTTGGTTCCGAAAGGTTCTCCAAAGCAGACAATGAAGCATATGCTGGAAAGTTTTGATCCGCGAGACATGTTTAACAAGAATCTGTCTCTGTTAGAGTCAGAAGAAGGAGCAAACAAGTCTGGAAAAGTACTTTTAAGGACCTGGAGGAATGCTATGGCTGAGATTAGAGAGGAAGCTCCCGTTTCAGTCTACGGGGCAAGTTTAAAGCAAGAACACGAAGAATCTGTTGAGGATGTGGTACAGGTTTTGGAGATGATAAAGGAGAATGTACCCCAACATTTTTCTGATTCAAACCCTGAAGAAATGCAATTTTTTGGTGGACTTGTGGAAAGATTATTGAGGGCAAGGGTAGAAGTAATGAAGGAGAAGGGGTTGGACATGGGTATGCCTATTCTTCTAGAGTACACTGAAGTAGGAGGATCTAAATGTCGACGCTTTTGGGGAGTGTTGGAGTTAAAAGTGGGAGATCCATTTTACAAAACAGTGTTGAGAAAGTATAACCACCTTTCATGGGAATCTTCGACCAGCAACGAAGCCTCCAGCTCGAACTCGTGGATTGAAAAGTTGAGGACAACCATTGTTTTGTTGAAATGCTTGGGTCCAGCCATAGAGGAAGAAGCTTCAGGCTTTGGCTATGAGGAATCCTTGGAGGAAGGATACTACGATCATGAATTGCATGAGTTAATGACGAGGATTGAGCAAGATGCTATGGGGTTTAATAAATCTTACGGAAAAATGAAGGCATCTATTGTTCTAACCGATGAACTCGTTTCTCCAAAGTTTTTGTTTGAGACATTAATCTTCAGAAGACTAATAGCATTGGGAAAATTGTCAATGTTTGGATCTGCAATCAAGTTCAAGATAACCCCATATGGGAAGATAAGGGTTGAGGACGATCCTTTCGGCACTCTGAAGACATGCTTCTGGAGTTTGATCTTGGTTCTTTATATACTGTTCTTCATAATCATATGGTTATTTTGTTTGATGGGATATGTGGGGCTTTTGATTTGTAGTGTACCAGTAATAAGAAAGTTATTAGTGTGTGGTTGGTGGCTTGTCATGCAAATTCGCATGTCTTGTAAATACTTGTATCGTAGAATGGGTAAGGTTATGAAAATAAAGAAGAAGGAATTGTAG 4329 0.4059 MMANHDDFTYDVFMSFKGENGTRYAFTDHLYRALLRHGINAFRDDQSLRSGDEIRPSLLQAIEGSRISLVVLCQNYASSSWCLDELAKIIHCYENKAKHVVAIFYLVEPSDVRYQKNSYATAMSKHESRYGKESEKVKAWRSALSRVCDLTGIHYRNHMYETEVIEKIVKDTSAKLPPMPLQIKHLVGLDSRFERLKSVIDIECNDSVCMLGIYGVGGIGKTTFAVDLYNKIRLHFEAASFLANVREKSNKSIKGLEDLQRTLLSEMGEETETIIGSTFKGSSDIKCRLGHKRVLLVVDDVDSVKQLEALAGGYDWFGPGSIIIIATRDKDVLLKHDVEIKRYEMEELNYHESLELFCWYAFNRSRPAENFASISTRAVRYAKGIPLALRVIGSNLKGRDPEQWEIELQKYRKVPDAEIQGVLEISYTSLSNLDQKIFLDIACFFKGERWDYVKRILDACDFNPDIQVFVSKCLITVDENGCLEMHDLIQDIGREIVRKESPSNPGYRSRLWSHKEVREVLKENSGSDTVEGIMLHPPKQEKLVHWTMTAFKKMKNLRILIVRNTIFSSGPSYLPNSLRLIDWKGYPSKSFPPDFYPHRIVDFKLPHSSLILKKPFQRFEDLTFINLSHCQSITQIPDLSGAKSLKVFTLDKCYKLVRFDKSIGFMPNLVYLSASECTMLTSFVPKIYLPSLEVLSFNFCRRLEHFPHVMQKMDKPLKIYMMNTAIKEIPKSIGNLTGLELIDMSVCKALKNLPSSFFLLPKLVTLKVDECSQLGESFQRFQESRHSVANGSPNLVTLHFCDTNLSYEDLCAILEIFPKLEDLKISHNGLVALPNSITGSSHLKSLDVSFCRNLKEIPELPLSIQKVDARHCQSLTSEASSMLWSKVSEEIQRIQVVMPMLKREIPEWFHCIGTEEIPHFWVRRKFPVVALALVFQETKETLSDFEDAFQSAIRSFTGFVNWHTVSLHLFIDGREICGRDYHYFNVGEDHVLFCDLRVLFRDEEWQGLDASLGDDWKAIQVQYGSDLILSHWGVNVYEQETNMDDIQFWFPPPSSTRNYLPSSLLVPKGSPKQTMKHMLESFDPRDMFNKNLSLLESEEGANKSGKVLLRTWRNAMAEIREEAPVSVYGASLKQEHEESVEDVVQVLEMIKENVPQHFSDSNPEEMQFFGGLVERLLRARVEVMKEKGLDMGMPILLEYTEVGGSKCRRFWGVLELKVGDPFYKTVLRKYNHLSWESSTSNEASSSNSWIEKLRTTIVLLKCLGPAIEEEASGFGYEESLEEGYYDHELHELMTRIEQDAMGFNKSYGKMKASIVLTDELVSPKFLFETLIFRRLIALGKLSMFGSAIKFKITPYGKIRVEDDPFGTLKTCFWSLILVLYILFFIIIWLFCLMGYVGLLICSVPVIRKLLVCGWWLVMQIRMSCKYLYRRMGKVMKIKKKEL* 1443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00471 1442 SUPERFAMILY "Winged helix" DNA-binding domain 418 522 IPR036390 -
Lapu3g00471 1442 FunFam Disease resistance protein (TIR-NBS-LRR class) 6 177 - -
Lapu3g00471 1442 PRINTS Disease resistance protein signature 734 750 - -
Lapu3g00471 1442 PRINTS Disease resistance protein signature 210 225 - -
Lapu3g00471 1442 PRINTS Disease resistance protein signature 288 302 - -
Lapu3g00471 1442 PRINTS Disease resistance protein signature 382 396 - -
Lapu3g00471 1442 Gene3D - 8 175 IPR035897 -
Lapu3g00471 1442 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 441 IPR027417 -
Lapu3g00471 1442 Pfam TIR domain 10 183 IPR000157 GO:0007165
Lapu3g00471 1442 Gene3D - 347 431 IPR042197 -
Lapu3g00471 1442 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 771 IPR044974 GO:0006952
Lapu3g00471 1442 Gene3D Ribonuclease Inhibitor 547 716 IPR032675 -
Lapu3g00471 1442 Gene3D Ribonuclease Inhibitor 717 887 IPR032675 -
Lapu3g00471 1442 SUPERFAMILY L domain-like 536 881 - -
Lapu3g00471 1442 Gene3D - 176 342 IPR027417 -
Lapu3g00471 1442 Coils Coil 1133 1153 - -
Lapu3g00471 1442 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 152 IPR035897 -
Lapu3g00471 1442 Pfam NB-ARC domain 193 405 IPR002182 GO:0043531
Lapu3g00471 1442 ProSiteProfiles TIR domain profile. 8 176 IPR000157 GO:0007165
Lapu3g00471 1442 SMART till_3 9 150 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00471 Lapu-Chr3 4832106 4839921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00471 10 784 WRKY Transcription Factor Family AT4G12020 30.326 1.76e-87 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00471 - - cam:101493067 1702.18