Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00468 ATGGCCGCTGTTCGCCTCTTCTTCTTCCTCCTCCTCCTCTCCCTCCTCCCTCTCTCCCTCCCCCTCCCGGAAAACCAAGCTCTCCTCACCCTAAAGAAATCCTTCTCCAACCCCCAAACCCTCTCCTCCTGGCTCCCAGACCAGAACCCTTGCACCGCGCGCTGGGTCGGCATCATCTGCGCCAACAACGTCATCAGCAGCCTCCACCTCACCGACCTCTCCCTCTCCGGCTCCATCGACATCGAAGCCCTCTCCCAGATCCCCTCTCTCCGCTCCATCAGCCTCGTCAACAACTCCTTCTCCGGGCCCATCCCCGCCTTCAATAAACTTGGAGTCCTCAAGGCCCTCTACTTGACCAACAATCAGTTCTCCGGCCCCATCCCCTCCAATTTCTTCTCCCAGTTAGCCTCCTTGAAGAAAATATGGCTCTCCAACAACAAATTCTCCGGCCCCATCCCCGACTCCTTGACCACTCTCCGATTCCTCTCCGAGCTCCATCTCGAGAACAACCAGTTCTCCGGCCCCGTCCCCGAACTCAAACAGGACATCAAATCCCTCGACATGTCCAACAACCAGCTCCAAGGCCAAATCCCCTCCTCCATGTCGCGCTTCGACTCCAAATCCTTCTCCGACAACAAAGAACTCTGCGGGAAGCCGCTGGATAACGAATGCGAGTCCGGCGCCAGTGATGGCTCCGCTTGGGGATTGAAGGTGGTTATGCTCATCTTCATTGCCGCTGTTCTCGCTGGGGCTTTTCTCGTGGTGCGATCCAAGCGTCAGCGCGATGATGACTTCAGCGTGATGAGCAGGGATAGCGCGGAGGAGGTGGTGCAGGTGCACGTGCCAAGCACCAACCACAGCAGGGGACACTCCGAGGGGAGCAAGAAAGAGTCGACGGTGTCGTCGAAGAAAGGGTCGTCGCGGAGTATTGGCGACCTCGTGATGGTGAACGATGAGAGGGGCGCGTTTGGCTTGCCCGATTTGATGAAGGCTGCGGCGGAGGTTCTCGGGAACGGTGGGCTGGGCTCGGCGTACAAAGCCGCCATGGCTAGTGGCTTGTCTGTGGTGGTAAAGAGGATGCGAGAGATGAATAAAGTGAGCAGAGACATCTTCGACGCCGAGATGAGACGCTTTGGGAGACTCTCAAACCCTAACATCTTGGCGCCTCTCGCCTACCATTACCGCAAGGAGGAAAAGCTGTTCGTCACAGAATACATGCCCAAAGGGAGCTTGTTATACGTCTTGCACGGTGACAGAGGATCGAGTCATTCGGACCTGAACTGGCCAATCCGTTTGAAAATTGTGAAGGGAATAGCACGAGGGTTAGGGTTTCTATACAAAGAATTTGCTAACGAAGACCTGCCACATGGAAACCTGAAATCCAGCAATGTTCTGCTAACTGATAATTACGAGCCTCTACTAGGCGATTTTGCCTTTCATCCACTCATCAACCACAACTACGCCGTACAGACAATGTTTGCCTACAAAACTCCGGATTACGTATCATACCAGCGTGTTACACAGAAAACCGACGTTTATTGCCTCGGAATCATCGTGCTTGAGATCATCACCGGGAAATTCCCTTCTCAGTATCATAGTAATGGCAAGGGTGGCACTGACGTGGTGCACTGGGTGTTCACTGCAATCTCTGAAAGAAGAGAGGCCGAATTGATTGATCCAGAGTTGAAGAGCAGTCACTCTAACTCCCTCGATAAAATGCTGCAACTTCTTCAAATAGGGGCTGCTTGCACGGAGAGCAACCCCGACCAACGACTAAACATGAAGGAAGCCATTAGGAGGATAGAGGAGGTTCAGGTTTAA 1821 0.5382 MAAVRLFFFLLLLSLLPLSLPLPENQALLTLKKSFSNPQTLSSWLPDQNPCTARWVGIICANNVISSLHLTDLSLSGSIDIEALSQIPSLRSISLVNNSFSGPIPAFNKLGVLKALYLTNNQFSGPIPSNFFSQLASLKKIWLSNNKFSGPIPDSLTTLRFLSELHLENNQFSGPVPELKQDIKSLDMSNNQLQGQIPSSMSRFDSKSFSDNKELCGKPLDNECESGASDGSAWGLKVVMLIFIAAVLAGAFLVVRSKRQRDDDFSVMSRDSAEEVVQVHVPSTNHSRGHSEGSKKESTVSSKKGSSRSIGDLVMVNDERGAFGLPDLMKAAAEVLGNGGLGSAYKAAMASGLSVVVKRMREMNKVSRDIFDAEMRRFGRLSNPNILAPLAYHYRKEEKLFVTEYMPKGSLLYVLHGDRGSSHSDLNWPIRLKIVKGIARGLGFLYKEFANEDLPHGNLKSSNVLLTDNYEPLLGDFAFHPLINHNYAVQTMFAYKTPDYVSYQRVTQKTDVYCLGIIVLEIITGKFPSQYHSNGKGGTDVVHWVFTAISERREAELIDPELKSSHSNSLDKMLQLLQIGAACTESNPDQRLNMKEAIRRIEEVQV* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00468 606 Gene3D Transferase(Phosphotransferase) domain 1 407 606 - -
Lapu3g00468 606 Gene3D Phosphorylase Kinase; domain 1 336 406 - -
Lapu3g00468 606 FunFam Nuclear pore complex protein NUP107 22 178 - -
Lapu3g00468 606 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
Lapu3g00468 606 SUPERFAMILY Protein kinase-like (PK-like) 334 601 IPR011009 -
Lapu3g00468 606 SUPERFAMILY L domain-like 23 204 - -
Lapu3g00468 606 Gene3D Ribonuclease Inhibitor 133 181 IPR032675 -
Lapu3g00468 606 Gene3D Ribonuclease Inhibitor 23 132 IPR032675 -
Lapu3g00468 606 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 9 605 IPR046959 -
Lapu3g00468 606 ProSiteProfiles Protein kinase domain profile. 330 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00468 606 MobiDBLite consensus disorder prediction 276 307 - -
Lapu3g00468 606 Pfam Protein kinase domain 334 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu3g00468 606 Gene3D Ribonuclease Inhibitor 182 226 IPR032675 -
Lapu3g00468 606 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00468 Lapu-Chr3 4816235 4818216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00468 2 606 Receptor kinase-like Gene Family AT3G42880 50.158 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lapu3g00468 Pkinase 5.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00468 - - vum:124828555 1049.27