Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00458 ATGCAAACGCAACTAATTTCCACTCTCGTCTTTACTCTCTTCCTCCTCTTTTTTTCTCCACCACGCGCCGCCGTGGCAAGGCCACCACCAGATCAACTTCGTTCATCGTGCGCACAGGCCAGGTACCCCGCTCTCTGCGTCCAAACCCTCTCCAACTTTTCCAATCCCACCGCCAAGCCTCTAGACCTGGCCCAGGCCGCCGTCAAGGCTAGCCTGGCCCGCACGCGCACCCTCTCTACCTACCTCGGGACGCTGAAGGCCGCATCGCAGGGTTTCGGGCGGAGGCAGCGAGTCGCGCTGAGTGACTGCGTGCAGCAGATATCCGACTCAGTGAGTGACTTAAGCAAGACACTGAACGAGTTGCAGCATCTCCGCGACGGAACCTTCGAGTGGCAGATGAGCAACGCCCAGACCTGGACCAGCGCCGCTCTCACCAACGGCGACACCTGCATCTCCGGCTTCAACGCCGCCGGCGCAGCCGGGAATATCAAGTTGGAGCTCAAGCAAAGAGTGACCGACGTCGCCATGCTCACCAGCAACGCGCTTTACCTCATCAATCGCCTCGCTGATAGCGTCACTGGGAAGCCTCACGCGAATTCCGGGAACTGA 609 0.5993 MQTQLISTLVFTLFLLFFSPPRAAVARPPPDQLRSSCAQARYPALCVQTLSNFSNPTAKPLDLAQAAVKASLARTRTLSTYLGTLKAASQGFGRRQRVALSDCVQQISDSVSDLSKTLNELQHLRDGTFEWQMSNAQTWTSAALTNGDTCISGFNAAGAAGNIKLELKQRVTDVAMLTSNALYLINRLADSVTGKPHANSGN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00458 202 FunFam Pectinesterase inhibitor 3 29 189 - -
Lapu3g00458 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 188 IPR035513 -
Lapu3g00458 202 NCBIfam pectinesterase inhibitor domain 6 188 IPR006501 GO:0004857
Lapu3g00458 202 SMART PMEI_2 28 184 IPR006501 GO:0004857
Lapu3g00458 202 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
Lapu3g00458 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 10 184 - -
Lapu3g00458 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 190 IPR035513 -
Lapu3g00458 202 CDD PMEI-like_3 35 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00458 Lapu-Chr3 4684646 4685254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00458 33 191 Carbohydrate Esterase AT3G14310 27.778 4.60e-15 71.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00458 - - gmx:100810705 267.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00458 3 4684646 4685254 Lapu3g00458 3 4684646 4685254 ECH