Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00452 ATGGATGATGCTGGAGGTTCCAAATTGAGTGGAATTAGGCAGATTGTGAGATTGAAGGAAATGTTTCAGAAGTGGCAAACTGTGACTCTGGGCTCAAAAGAGTCAAACAATGATTCTGATGTGGCTCGTCCAGGAGGTATTCCACCAATGATTAACAAAAGGCTAACGAATGTTTTGTATTGTGACTCTGATGAGGATAGCTGCTACAGCCCTCAACCACCACATGATGTTCCCAAAGGGTACTTAGCAGTCTATGTTGGACCTGAGCTTCGGAGGTTTATCATCCCCACAAGCTACCTTAGCCACTCTTTGTTCAAGGTTTTGTTGGAAAAGGCTGCAGAGGAATTTGGGTTTGATCAGAGTGGTGGACTCACCATTCCATGTGAAATTGAGACCTTCAAATACCTCTTGAATTGCATGGAGAACCACGATGACACCTCCGACTCTTGGTGGAATTGCAGCTGGAAACACAGGAACTGTGGAAGAATAAAAAATTGCTCTGATCTATATAGAAGGACAATCATAGTGCTGGTTTCAAGTGCAAGGGTTTTGATTTCTTACATGAAGAATGATATAACTCTCCAGCTAGAAAGATTTCTGATGCCAAATTTGCTTGTAGAACAGTTGTTAATCATCTATGTACTTTTCATCAAACGTTTCCCCAATACATGTACTCTGTCAACATATTCAAATAGAAAATTTTTGACATTTAATGAACTATATATCCATTAA 732 0.4003 MDDAGGSKLSGIRQIVRLKEMFQKWQTVTLGSKESNNDSDVARPGGIPPMINKRLTNVLYCDSDEDSCYSPQPPHDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKVLLEKAAEEFGFDQSGGLTIPCEIETFKYLLNCMENHDDTSDSWWNCSWKHRNCGRIKNCSDLYRRTIIVLVSSARVLISYMKNDITLQLERFLMPNLLVEQLLIIYVLFIKRFPNTCTLSTYSNRKFLTFNELYIH* 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00452 243 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 61 136 IPR003676 GO:0009733
Lapu3g00452 243 Pfam Auxin responsive protein 68 139 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00452 Lapu-Chr3 4642402 4644572 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00452 1 147 Calmodulin-binding Proteins AT3G43120 68.212 1.94e-70 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00452 K14488 - vra:106767875 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00452 3 4642402 4644572 Lapu3g00452 3 4642402 4644572 ECH
Lapu3g00452 3 4642402 4644572 Lapu9g00357 9 3737306 3737977 PCT