Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00437 ATGGCATCAAGGAAAGCTTTTAACCAATGCTTGGTTCTGCCAATCTTGCTGATGAATTGTTTTGTTTTGCTGGTTCAATGCGGTAGGCCACATAACACAGAAGAAGGAGAGGATTTTGTCACAGCAACCTGCAAACACACCCTTCATTTCCAAGTATGCGTTTCTTCCCTAAGATCAGTCCCTAGTAGTAGCAAGACATCAGATCTCAAAGTGCTTGCTGAGATAGCACTGAATCTCAGCACAACATATGCTGCAGACACTTTGTCCCGTGTTCATGAGCTGCAGTCTAATTCTTCTGCTGCCAACATTTACGTGTCCCGTTGCTTAAGGGACTGTGAAGAGGAATTCTCGGAAGCCATAGAGAACTTGCAGGACTCAAAAGAAGCACTTGCCAATGGAGATTGTGACAAAGTGGACACATTGGTTTCTGCTGCTATGTCTGATGCTGAGACATGTGAGGATGGCTTCAAGGACATGCAAAGTGAGGACAATCATTCCACTTCTCCTCTTACTCAGCGTAACCTTTACTTCTCTGAACTATGTAGTAATGCTCTTGCTATTGCAAAATTACTAGTTTGA 579 0.4352 MASRKAFNQCLVLPILLMNCFVLLVQCGRPHNTEEGEDFVTATCKHTLHFQVCVSSLRSVPSSSKTSDLKVLAEIALNLSTTYAADTLSRVHELQSNSSAANIYVSRCLRDCEEEFSEAIENLQDSKEALANGDCDKVDTLVSAAMSDAETCEDGFKDMQSEDNHSTSPLTQRNLYFSELCSNALAIAKLLV* 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00437 192 Gene3D Invertase/pectin methylesterase inhibitor family protein 35 192 IPR035513 -
Lapu3g00437 192 Coils Coil 109 129 - -
Lapu3g00437 192 PANTHER PECTINESTERASE INHIBITOR-LIKE 15 191 - -
Lapu3g00437 192 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 38 191 IPR035513 -
Lapu3g00437 192 Pfam Plant invertase/pectin methylesterase inhibitor 38 187 IPR006501 GO:0004857
Lapu3g00437 192 FunFam Invertase/pectin methylesterase inhibitor family protein 35 192 - -
Lapu3g00437 192 CDD PMEI-like_1 39 191 - -
Lapu3g00437 192 NCBIfam pectinesterase inhibitor domain 14 191 IPR006501 GO:0004857
Lapu3g00437 192 SMART PMEI_2 35 187 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00437 Lapu-Chr3 4445361 4445939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00437 40 189 Carbohydrate Esterase AT1G53830 26.582 4.95e-10 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00437 - - gmx:100785210 309.301