Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00426 ATGGCCACCCCCTCATGCCCTGCACCCATGAAGGCCACGTCCAACGGAGCCTTCCAACATGAAAACCCTCTCGATTATGCGCTTCCTCTGTTAATCCTCCAAATATGTTTGGTCGTTTCTTTTACTAGATTTCTTGCATTCCTCTTCAGACCCCTCAAACAACCCAGAGTCGTTGCTGAGATCATCGGAGGAATACTACTTGGTCCATCTGCAATTGGGCGAAACGAGAAGTTCTTGAATACGGTTTTCCCAGAGAAAAGCATAACAGTTCTTGACACACTGGCCAACATAGGTCTTTTGTTTTTTTTGTTTCTTGTGGGGCTTGAGCTTGACATGCGTGCACTTCAACGTACTGGTCATAAGGCCTTAGCCATTGCCCTCTGTGGGATCACTGTGCCTTTTGTTCTTGGCATTGGCACTTCCATTGCCCTCCGAGCGACTGTATCGAAGGGTGCTGAACTATTTCCTTTTCTGGTCTTCATGGGCGTTGCCCTCTCAATCACAGCCTTTCCTGTCCTTGCTAGGATCCTGGCTGAGCTTAAACTCCTCACCACTGATGTTGGTCGCATTGCAATGTCTGCTGCTGCTGTCAATGATGTTGCAGCTTGGATTCTTCTTGCTCTTGCCATAGCCATTTCTGGTTCTGACGCATCCCCCTTTGTTCCTCTTTGGGTATTGCTCTGTGGTGCTGCTTTTGTCATCTTTGTTGTCTTTGCCATTAGGCCATTGCTTGTGGTTATGGCTAACCGTTCCCTGGAGGGTGAGCCAGTGAAGGAGGTGTACATATGCATCACATTGACTCTGGTTTTGGCTTGTAGTTTTATCACTGATACTATTGGAATTCATGCCCTCTTTGGGGCTTTTGTGGTTGGTACTGTTATGCCCAAAGAAGGTTCCTTTTCTGGGGTATTGACAGAGAGGATAGAAGACCTGGTGTCTGGCCTTTTCATGCCACTGTATTTTGTGTCCAGTGGCTTGAAGACTAATGTGGCAACAATCAAGGGAGGTCTTTCTTGGGCAATGCTAATGCTTGTTATATTCAATGCTTGCTTTGGTAAGATTGTTGGCACTACTGTTGTTTCATTACTATGTAAGGTACCTTCCAGAGAAGCCCTGGCTCTTGGATTTCTCATGAACACAAAGGGCTTGGTAGAGCTCATTGTTCTCAACATTGGGAAGGACCGTAAGGTGTTGAATGACCAAGCATTTGCCATTTGTGTTGTGATGGCATTGTTTACCACCTTCATTTCCACCCCAATAGTGATGGCTGTGTATAAACCAGCTCGCAGAGGAGCACCTTACAAGCACAAAACAATTCAACGAGATCCTGACACCGAGCTTCGAATGCTAGCTTGCTTCCACAGCACCCGCAATATTCCCTCGCTAATCAATCTAATAGAGTGTTCTCGTGGATCCCGAAGGAAAGGAAAGCTTTGTATATATGCAATGCATTTGATGGAGCTCTCGGAGCGATCTTCAGCAATCACAATGGTTCACAAGACACACAAGAATGGCATGCCCTTTTGGAACAAGAAGCGGGATGGCAAAGATCAAATGATCATAGCTTTTCAGGCTTATGAGAAACTGAGCAGTGTCAGTGTGCGACCCATGACAGCCATTTCTGCTCTCAATAACATCCATGAGGATATCTGTACTAGTGCTCACCGAAAGCGTGCAGCCATGATCATCCTTCCATTCCACAAACACCAACGCGTGGATGGATCAATGGAGTCACTGGGACATTCATTCCATGTGATGAATCAACTTGTGCTAAGCCATGCTCCTTGCTCAGTGGGAATTTTGGTTGATCGAGGTTTTGGGGGGACAAGCCAAGTCCAAGCTAGTGATGTGTCTTATAAGATAGTGGTAGCCTTCTTTGGAGGGCGTGACGATCGTGAAGCACTTTGTTATGGTATGAGAATGGCTGAACACCCGGGGATTTTTCTGAATGTGGTTAAGTTTGTAACTCCACCAGGGACATCATTGGCCTTCGGTGCTAAATTGGTTGGGGTGTCATCAAACAAAGATGGGAAAAGCATGGATGTGGTTTATGGGAAACATTATGATGATAATAAAAAACAGGATGATGAATTGTGGAGTGAGTTTTTAAGTGCATGCAGCGACAACACCCAAGAGTCAATGAAGTATGAGGAAAAGGTGGTGGAAAGCAAAGGAGATATCGAGACAGCGTTGAAGGAAATGAATAGATGCAACCTAATCTTGGTTGGTAGAATGCCATCAGTGGCACCTTTGGGCAGCAAAAGTGATTGTCCAGAGCTTGGACCTGTTGGAGGCTTTATTGCTACTTCAGATTTCTCCACTGTTACGTCAGTTATGGTAATTCAGCAATACAATCCCTCAGCTGACGTTCATCCCTTAGTGATGGAGGAATCTGATTTCCCAGATATATGTCAGATACATTAG 2424 0.4554 MATPSCPAPMKATSNGAFQHENPLDYALPLLILQICLVVSFTRFLAFLFRPLKQPRVVAEIIGGILLGPSAIGRNEKFLNTVFPEKSITVLDTLANIGLLFFLFLVGLELDMRALQRTGHKALAIALCGITVPFVLGIGTSIALRATVSKGAELFPFLVFMGVALSITAFPVLARILAELKLLTTDVGRIAMSAAAVNDVAAWILLALAIAISGSDASPFVPLWVLLCGAAFVIFVVFAIRPLLVVMANRSLEGEPVKEVYICITLTLVLACSFITDTIGIHALFGAFVVGTVMPKEGSFSGVLTERIEDLVSGLFMPLYFVSSGLKTNVATIKGGLSWAMLMLVIFNACFGKIVGTTVVSLLCKVPSREALALGFLMNTKGLVELIVLNIGKDRKVLNDQAFAICVVMALFTTFISTPIVMAVYKPARRGAPYKHKTIQRDPDTELRMLACFHSTRNIPSLINLIECSRGSRRKGKLCIYAMHLMELSERSSAITMVHKTHKNGMPFWNKKRDGKDQMIIAFQAYEKLSSVSVRPMTAISALNNIHEDICTSAHRKRAAMIILPFHKHQRVDGSMESLGHSFHVMNQLVLSHAPCSVGILVDRGFGGTSQVQASDVSYKIVVAFFGGRDDREALCYGMRMAEHPGIFLNVVKFVTPPGTSLAFGAKLVGVSSNKDGKSMDVVYGKHYDDNKKQDDELWSEFLSACSDNTQESMKYEEKVVESKGDIETALKEMNRCNLILVGRMPSVAPLGSKSDCPELGPVGGFIATSDFSTVTSVMVIQQYNPSADVHPLVMEESDFPDICQIH* 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00426 807 PANTHER CATION/H + ANTIPORTER 5 785 - -
Lapu3g00426 807 FunFam Cation/H(+) antiporter 15 30 432 - -
Lapu3g00426 807 Gene3D - 30 432 IPR038770 -
Lapu3g00426 807 Pfam Sodium/hydrogen exchanger family 36 421 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00426 Lapu-Chr3 4322221 4325814 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00426 3 800 Antiporter Super Family AT3G17630 67.584 0.0 1085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00426 K26731 - gmx:100780382 1371.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00426 3 4322221 4325814 Lapu3g00426 3 4322221 4325814 ECH