Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00415 ATGGAGGACAAAGTTGCATTGAAAAAATTGCTCCAAGTTCAGAAAAGGGCACGTGTTGGTGATACAGAGGCACTGCACTGGACTCAGGAACCCTCCATCAGAAATACTTTAGGATCTACTCTTCTCAGTTTGAGTCTTGATAACTTTGATCCTCCCCAAAGTCATGAGCAGCAGCACCTGAACCAATTGGGTTTGTTGCAAATTGAGCTAGAGGAGGTGAAGAAGGAGAATCAAAATTTAAGGTCAATGCTTAATGAGATCACTGAACATTACGCTGTTCTTCAGAACCAGTTATTGTTGGCGATGCAGCAAAACAAACTGTCTTCATCACCTCCGAATAATGAGGACATGCAGGCAAGTGAAATGAAGAACAAAGTAACACCACAAGAAGAAAAAATCATAGAAGATCAGGCATTTGAGGCTTCTTGCAAGAAAGCTAGAGTGTCCGTTAGAGCACGATCAGAATTATCTTTGAAGGGTGATGGGTGTCAATGGAGAAAATATGGACAAAAGATATCAAAGGGTAACCCTTGTCCTCGGGCCTACTATCGTTGCAACATGGGAACAGCATGTCCGGTTCGCAAGCAGGTTCAGAAGTGTGCTGAGGATGAAAGTGTTGTGATCACAACCTATGAGGGGAATCATAATCATTCACTCCCTGCAGCAGCCAGATCCATGGCTTGCACAACATCAGCAGCATTGACCATGTTCCTTTCTGGCTCAACCACTAGTTCACATGCCACCACTTTCTTAAACCCTTACCTCTTCTCTTCACTGTCTGCTTCTACCCACTATCCATCTGCATCATCATGTCCCACTATAACACTGGACTTAACCCAGCCCTCTAAGAACTACCTCAAATTCCCAACTGCAACTGCTATTTCTTCAAACCACTCTCAAACATTCCCTCTTTCATTGGATGGTTACCCTCAACAGTCTGAGCGATTACCCTCGGAGAAAAACCTTCCCTTGGTGGATGTTCTCAGTGCTGCCATCGCTAGGGATCCTTCTCTCAGAGCAGCATTAGAAGCAACCGTTTCCTCTATCATCGGAGACTCTCAGAACATCAATAACCACGGCCAACTTAGTAGGAGTGATTATGACCCTTCTTCTAAGATGTCTGCTCAAGTTTCACAGGATTAG 1143 0.4436 MEDKVALKKLLQVQKRARVGDTEALHWTQEPSIRNTLGSTLLSLSLDNFDPPQSHEQQHLNQLGLLQIELEEVKKENQNLRSMLNEITEHYAVLQNQLLLAMQQNKLSSSPPNNEDMQASEMKNKVTPQEEKIIEDQAFEASCKKARVSVRARSELSLKGDGCQWRKYGQKISKGNPCPRAYYRCNMGTACPVRKQVQKCAEDESVVITTYEGNHNHSLPAAARSMACTTSAALTMFLSGSTTSSHATTFLNPYLFSSLSASTHYPSASSCPTITLDLTQPSKNYLKFPTATAISSNHSQTFPLSLDGYPQQSERLPSEKNLPLVDVLSAAIARDPSLRAALEATVSSIIGDSQNINNHGQLSRSDYDPSSKMSAQVSQD* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00415 380 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 53 359 IPR044810 GO:0003700
Lapu3g00415 380 SUPERFAMILY WRKY DNA-binding domain 153 220 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g00415 380 Gene3D WRKY domain 143 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu3g00415 380 SMART WRKY_cls 159 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g00415 380 Coils Coil 56 97 - -
Lapu3g00415 380 Pfam WRKY DNA -binding domain 161 217 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu3g00415 380 MobiDBLite consensus disorder prediction 353 380 - -
Lapu3g00415 380 ProSiteProfiles WRKY domain profile. 154 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00415 Lapu-Chr3 4195242 4198887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00415 132 350 WRKY Transcription Factor Family AT4G04450 48.178 2.74e-60 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu3g00415 WRKY 3.7e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00415 - - pvu:PHAVU_003G124000g 579.326