Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00413 ATGGGGGATGAGGTTGTGTTGTTGGATTTCAATCTGAGTATGTTCTGTGTAAGAGTGAAGATTGCACTGGCAGAGAAAGGGGTTGAGTTTGAGAGCAAGGAAGAGGATCTGGTGAACACCAAGAGTGCACTGCTTCTGCAAACGAACCCTGTGTACAAGAAAGTTCCTGTTCTCATCCACAATGGCAAGCCAATCTCTGAATCTCTCATCATTGTTGAGTATATTGATGAGATTTGGAGGGATACGGCTCCACTTTTGCCTACTGATCCCTACCAGAGAGCTCAAGCCAGGTTCTGGGCTGATTTTGTTGATAATAAGGTGCATGAAGTTTCAAAGAGGATATGGACTGGGAAGGTAGGTGAACATGAGGCAGACAAGAAGGAGTTAGTGGAGAATTTGAAGCAATTGGAGGAGGCTCTTGGGGACATGCCATATTTTGGGGGTGACACATTTGGGTTTGTTGATGTTGCTTTGATTCCATTCAACAAATGGTTCTATAGTTATGAGAAAATTGGCAATTTTAAACTGGACTGCCCAAAACTCACTGCTTGGGCAAACAGATGTTTGGCGAAAGAAAGTGTGTCCAAATATGTTTCTGATGAAAAGGATGTGTATGAGTTTGTTCTGAGCCATAGGAAAAGAATTGGGGTGGACTGA 657 0.4323 MGDEVVLLDFNLSMFCVRVKIALAEKGVEFESKEEDLVNTKSALLLQTNPVYKKVPVLIHNGKPISESLIIVEYIDEIWRDTAPLLPTDPYQRAQARFWADFVDNKVHEVSKRIWTGKVGEHEADKKELVENLKQLEEALGDMPYFGGDTFGFVDVALIPFNKWFYSYEKIGNFKLDCPKLTAWANRCLAKESVSKYVSDEKDVYEFVLSHRKRIGVD* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00413 218 Gene3D Glutaredoxin 1 88 - -
Lapu3g00413 218 FunFam Glutathione S-transferase U20 89 218 - -
Lapu3g00413 218 Pfam Glutathione S-transferase, C-terminal domain 123 187 - -
Lapu3g00413 218 SFLD Main (cytGST) 3 215 - -
Lapu3g00413 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 11 205 IPR045073 -
Lapu3g00413 218 CDD GST_C_Tau 90 209 IPR045074 GO:0004364|GO:0006749
Lapu3g00413 218 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Lapu3g00413 218 Coils Coil 119 139 - -
Lapu3g00413 218 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Lapu3g00413 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 207 IPR010987 -
Lapu3g00413 218 CDD GST_N_Tau 5 79 - -
Lapu3g00413 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Lapu3g00413 218 FunFam Tau class glutathione S-transferase 1 88 - -
Lapu3g00413 218 Gene3D - 89 218 - -
Lapu3g00413 218 SFLD Main.3: Omega- and Tau-like 3 215 IPR045073 -
Lapu3g00413 218 Pfam Glutathione S-transferase, N-terminal domain 8 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00413 Lapu-Chr3 4169577 4170697 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00413 1 218 Glutathione S-transferase Gene Family AT1G17180 56.818 2.28e-90 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00413 K00799 - gmx:100781460 380.178