Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00406 ATGGGTCTGGTAAGCCAGGAGCCTGTGTTGTTTAATGACACCATTCGAGCCAATATTGCATATGGAAAAGGTGGTGATGCAACAGAAGCTGAAATTATAGCTGCAGCAGAACTGGCAAATGCACACAAGTTCATTTGCAGTTTGCAGAAGCGGGGCTATGTTACATTGGTGGGAGAGAGAGGGATTCAACTATCGGGAGGGCAGAAACAGCGGGTTGCAATTGCGAGAGCCATAGTGAAGAGTCCAAAAATATTACTGCTAGATGAAGCCACCAGTGCACTTGATGCTGAGTCTGAAAGAGTGGTCCAGGATGCGCTTGATCGAGTGAGGGTGGACAGAACCACCATTGTGGTGGCTCACAGGTTATCCACCATAAAGGATGCAGATTCAATTGCAGTGGTTAAAAATGGAGTCATTGCAGAGAAAGGAAACCATGAGACCTTACTTAACAAAGGTGGTACATATGCTTCCTTAGTAGCACTGCACATCAGTGCTTCTTCTTCATGA 507 0.4596 MGLVSQEPVLFNDTIRANIAYGKGGDATEAEIIAAAELANAHKFICSLQKRGYVTLVGERGIQLSGGQKQRVAIARAIVKSPKILLLDEATSALDAESERVVQDALDRVRVDRTTIVVAHRLSTIKDADSIAVVKNGVIAEKGNHETLLNKGGTYASLVALHISASSS* 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00406 168 PANTHER ABC TRANSPORTER B FAMILY 1 161 IPR039421 -
Lapu3g00406 168 Gene3D - 1 162 IPR027417 -
Lapu3g00406 168 FunFam ABC multidrug transporter, putative 33 163 - -
Lapu3g00406 168 ProSitePatterns ABC transporters family signature. 64 78 IPR017871 GO:0005524|GO:0016887
Lapu3g00406 168 Pfam ABC transporter 2 92 IPR003439 GO:0005524
Lapu3g00406 168 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 161 IPR027417 -
Lapu3g00406 168 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 4 161 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00406 Lapu-Chr3 4117230 4117816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00406 1 165 Calmodulin-binding Proteins AT2G36910 57.485 9.52e-56 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00406 K05658 - gmx:100777713 273.863