Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00400 ATGGCTACGAAGAAAGTTATTGCTATATGCCAATCGGGAGGTGAGTTTGTGACAGATAAGGATGGATCATTGTCATACAGTGGAGGGGATGCGTATGCAATAGACATTGATCAACAGACAAATTTAAGTGATTTTAAGTCAGAGATAGCAGAAATGTTCAACTGCAATGTAAGTACGATGATTATCAAGTACTTCCTTCCTGGCAACAAGAAAACACTTATTACAGTGTCTAAAGACAAGGATTTGCAACGCATGGTCAGTTTCCTTGGGGATGTTAACACGGTTGATGTGTTTGTTATGTCAGAGGAAGGAGCTGCTCGGAATAACAATTCCAACATGCCTGGTAGTAGGTAG 354 0.404 MATKKVIAICQSGGEFVTDKDGSLSYSGGDAYAIDIDQQTNLSDFKSEIAEMFNCNVSTMIIKYFLPGNKKTLITVSKDKDLQRMVSFLGDVNTVDVFVMSEEGAARNNNSNMPGSR* 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00400 117 Gene3D - 26 99 - -
Lapu3g00400 117 CDD PB1_UP2 9 100 - -
Lapu3g00400 117 SMART PB1_new 19 102 IPR000270 GO:0005515
Lapu3g00400 117 PANTHER OS05G0427100 PROTEIN-RELATED 9 86 - -
Lapu3g00400 117 SUPERFAMILY CAD & PB1 domains 21 94 - -
Lapu3g00400 117 Pfam PB1 domain 21 91 IPR000270 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00400 9 86 MAP Kinase Kinase Kinase AT2G35050 32.500 5.91e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00400 - - vra:106769211 229.565
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00400 3 4051982 4052335 Lapu3g00400 3 4051982 4052335 ECH