Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00362 ATGGTTCGGCCAAAGAGGTCCATTCTAGTAGCAGTTTTCAATATGAACATCAATGCTATTCTCATTCTCCCCTTTCTATGTTTCTTTCTTTTAAATTTGAGTACTTTCTTCATTAAAGCATCTGCAATAAATGCATCCTATGAATCTGATAGAATAATCGATCTTCCTGGTCAACCTTCAAGCCCCTCACTCTCACACTTTTCAGGTTACATCACTGTCAATGAAAACCATGGAAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCTGTCTGAACCCTCCAAAAAGCCTCTCCTTCTCTGGCTTAATGGAGGACCCGGATGCTCCTCTATTGGGTATGGTGCCGTTGTTGAGATTGGACCTCTAATAGTCAACAAAAATGGGGAAGGACTACATTTCAACTCATATTCCTGGAATCAAGAAGCAAATTTGTTATTTGTGGAGTCTCCTGTTGGAGTTGGATTTTCTTATACCAACACCTCTTCTGACACCATATTAGAGGATAACTTTGTGGCTGAGGATACCTACAATTTCTTGGTGAATTGGCTACAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTACGGTCACTATATCCCTCAGCTTGCAGAGTTAATCTTTGATCGAAGCAAAGATAGCAAGAAATACCCCTTTATTAATCTTAAAGGTTTTATTGTAGGAAACCCAGAGACTGATGACTACTATGACAATAAAGGCCTTCTGGAATATGCATGGAGTCACGCAGTTATATCAGACCAGCAATATGAGAAAGCAAAACAAGTATGTGATTTTAAACAATTTGATTGGTCTAATGAATGCAATAAGGCCATGAACGAAGTGTTCCAAGATTACTCAGAAATTGACATATACAACATTTATGCCCCGGCATGTCCTTCAAACACCACATCCTCAACAGCTGATAATAGCAACAGTAGCGGCCATGAATCATTTACCAAGATGAGAAATGATTATAGAGAAAGGAGGATGAGAATTTTTGGTGGCTATGACCCTTGCTATTCCAATTATGCAGAAGAATATTTCAATAGAAAAGATGTTCAGTCATCCTTTCATGCAGATACTAAAAGAGCCACTAACGTGGCATGGAAGGTTTGCAATAATTCCATATTGAGGGCTTACAACTTCTCTGTTTTCTCGGTGCTACCTATCTACACCAAACTCATCAAGGGTGGGCTTAAGATATGGATTTACAGTGGAGATGCAGATGGGAGAGTGCCAGTGATTGGGACACGATATTGCGTTGAAGCTCTTGGGTTACCTCTCAAGTCTAGGTGGCGAACTTGGTACCATGAGAATCAGGTTGGAGGAAGAATAGTGGAATATGAAGGATTGACATATGTGACAGTGAGAGGAGCTGGTCACTTGGTGCCATTGAACAAGCCTAGAGAAGCTCTCTCCCTTATTCATTCTTTCTTAACTTCTGACCATCTTCCTACTCGTGGATAA 1479 0.4043 MVRPKRSILVAVFNMNINAILILPFLCFFLLNLSTFFIKASAINASYESDRIIDLPGQPSSPSLSHFSGYITVNENHGRALFYWFFEALSEPSKKPLLLWLNGGPGCSSIGYGAVVEIGPLIVNKNGEGLHFNSYSWNQEANLLFVESPVGVGFSYTNTSSDTILEDNFVAEDTYNFLVNWLQRFPQFKSRDFFISGESYGHYIPQLAELIFDRSKDSKKYPFINLKGFIVGNPETDDYYDNKGLLEYAWSHAVISDQQYEKAKQVCDFKQFDWSNECNKAMNEVFQDYSEIDIYNIYAPACPSNTTSSTADNSNSSGHESFTKMRNDYRERRMRIFGGYDPCYSNYAEEYFNRKDVQSSFHADTKRATNVAWKVCNNSILRAYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLKSRWRTWYHENQVGGRIVEYEGLTYVTVRGAGHLVPLNKPREALSLIHSFLTSDHLPTRG* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00362 492 FunFam Carboxypeptidase 391 485 - -
Lapu3g00362 492 Gene3D alpha/beta hydrolase 44 313 IPR029058 -
Lapu3g00362 492 FunFam Carboxypeptidase 46 304 - -
Lapu3g00362 492 ProSitePatterns Serine carboxypeptidases, histidine active site. 455 472 IPR033124 GO:0004185
Lapu3g00362 492 Gene3D - 391 484 - -
Lapu3g00362 492 Pfam Serine carboxypeptidase 56 484 IPR001563 GO:0004185|GO:0006508
Lapu3g00362 492 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 53 472 IPR001563 GO:0004185|GO:0006508
Lapu3g00362 492 Gene3D - 343 380 - -
Lapu3g00362 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 146 156 IPR001563 GO:0004185|GO:0006508
Lapu3g00362 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 455 468 IPR001563 GO:0004185|GO:0006508
Lapu3g00362 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 133 145 IPR001563 GO:0004185|GO:0006508
Lapu3g00362 492 PRINTS Carboxypeptidase C serine protease (S10) family signature 181 206 IPR001563 GO:0004185|GO:0006508
Lapu3g00362 492 FunFam Carboxypeptidase 340 488 - -
Lapu3g00362 492 SUPERFAMILY alpha/beta-Hydrolases 48 488 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00362 Lapu-Chr3 3622910 3625755 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00362 344 488 Calmodulin-binding Proteins AT2G22960 27.397 9.61e-13 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00362 K16297 - gmx:100792930 880.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00362 3 3622910 3625755 Lapu3g00362 3 3622910 3625755 ECH