Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00334 ATGGTTGACACTTTCAGTATAGAGAGCAGGCTTCATATAAGAGAGTTTGATGAAGATAGAGATGTTAAGGTGGTGGGGAAGCTCGAGAGGAAGTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTATGCGAACTCCTTCTGAATCATTACTGAAGATAGGTTGCATATTAGGCCTTAGGGTCTCTCCTTCACACAGGAGAAAGGGGGTTGGACTAAAACTTGTCACCTCAGTTGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCACTCCTGGCCACTGAAAAGAACAATGATGCCTCTAGAAACCTATTTACCAACAAATGCAAATATGTGAGCCTCAGCTCACTTTTCATATTTGTGCATCCAATTAGTTTCCCTGCAAAGCACATTTCCAAGGATATAGAAATTGAGAAGGTAAACATAGACCAGGCAATTTCCTTATACAGAAGAAACCTGAGAGCCAAAGAATTGTACCCATTAGACATGGATAGTATTTTGAAGGAGAACCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGAAGGAGGCTTACTCAACTTGCAGAGAAAGGTAGAGAGTGAAGACACTATTACCAATGAAATCACAAGCTCATGGATCATCTTTAGCATATGGAATACTTGTGAGGCTTATAAGCTTCGACTCAAAAAGTCTCAGCCACTTAGGTTTCTTCACACAACTTTAAATCATGCAAGAGACAAAATTTTCCCATGTCTGAGAATGTCGGTGAGTGACTCACTGTGCAGACCCTTTGGGTTTCTCTTCCTTTATGGACTCCATGGAGAGGGAGAGAACCTTGGGGAACTAATGGAATCCATATGGAGGTTCACATCGAGGATGGGAGAAAGTTTGAAGGACTGCAGAGTGGTTATAACCGAGCTAGGGTTTGGGGATCCACTTGTAAACCATGTCCCTCAGACAGCTTCAATGTCATGTATCGATGATATTTGGTACTCGAAAAGAATTTCAAGCCACAGTGATGAAAAGGATGACGAAGTGCTGATTAAGAGACAAATCGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1194 0.4263 MVDTFSIESRLHIREFDEDRDVKVVGKLERKCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPSHRRKGVGLKLVTSVEEWMLRNGAEYALLATEKNNDASRNLFTNKCKYVSLSSLFIFVHPISFPAKHISKDIEIEKVNIDQAISLYRRNLRAKELYPLDMDSILKENLSLGTWVSYYKEGGLLNLQRKVESEDTITNEITSSWIIFSIWNTCEAYKLRLKKSQPLRFLHTTLNHARDKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMESIWRFTSRMGESLKDCRVVITELGFGDPLVNHVPQTASMSCIDDIWYSKRISSHSDEKDDEVLIKRQIGNVFVDPRDF* 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00334 397 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 8 397 - -
Lapu3g00334 397 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
Lapu3g00334 397 CDD NAT_SF 62 133 - -
Lapu3g00334 397 Gene3D - 12 162 - -
Lapu3g00334 397 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 234 IPR000182 GO:0016747
Lapu3g00334 397 Pfam Acetyltransferase (GNAT) family 65 150 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00334 Lapu-Chr3 3352982 3354748 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lapu3g00334 Acetyltransf_1 1.9e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00334 - - gmx:100814448 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00334 3 3352982 3354748 Lapu3g00334 3 3352982 3354748 ECH