Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00319 ATGGAACTTCATGGAATCTATTATATTCTTCAACTAACTGCATTCACATTTCTTTTTGTTTTATCAATATACCTTAAAGGTTTATTAAATTCTGCTTTGAAAATGAGAGTTGAGAAAGAAGGAGCAAAAAATGAAGGTGGGCATGGTGGTGGTTTTTTCCACATGTTTGACTGGACCTCAAAATCACGGAAGAAATTATTTGCAACCATGCCAGAGTCCTTGAAACAAAGAAGAAAAGTTGATGGCAACTTGGCAACGATGCTTCCCTATCTGGTGGACGAAGATGGTGAAATTGGAATAGGGGGAAGTATTAGAGATAGTGGTGATCATAGTTGTGCTACATCTGTTATAGATTCTGAATTATGTGGAACAAGGGCCCCTGGTGTAGTTGCCAGGCTTATGGGATTAGATTCATTGCCCTCTTCCAGTTTTTCTGATCCATATTCTACCCCATACTTTGACAGCCAATGTATTCAAGATGTGCAGTACTGGAGGACAAAACTCAATCCTCTTCATGACCATCAAATAGTATATTCTGGAAAGTTGGTTGAAAAGGCTGAGGGGACTTCTAGGAACTTCATGGAGGCAAAGCCTCTACAGAGCCATAGCAGGCCGATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCTAAATCTATTCCCCTTACACACCATAAACTTTTGTCCCCAATTAAGAGTCCTGGCTTTGTTCCATCAAATAATGCTACATACATAATGGAAGCTGCCGCAAGAATTATTGAACCTGGACGCCAAGCTGCTACAAAGGCTAAAACACCTCTTGTGGCATCATCATCGGTATCATTGAGGGTTAGAGACCTTAAAGAAAAAGTGGAGGCTTCACAAAAGGGACAACTAATTACTTCATCTTCGCTGACCTCTAGAGTTAGAGATACAAAAGGAAAAAGAGAATCTTCTCTTAGAACTAGTAGTCTTTCTGAACCTTCTCAAAGGTTGACTGAGTCTAATGATGCCAAATATCTAAAGGGACAATCTTCGAACAAAAGTTGGAATGGACTTGTGGATACACCTGTCAGATCATCTACTCAAGTAGAAGAAGATCCTTATTCGAAAAATAAAGGGAAGTCTATATCACTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGCTTGAGTTTTAGTAGTGGAAGAAATTTGGTGGAGCAGAGAGAACAATGTGACACTAAAAACTCCCAGAAGCCTCTGAAGGAGGCTAATGTTAAAAAAAGTTTGCACATGAAATCCTCTGGTCAAGATGCTTCTGGTGTTCTCAGGCAGAATAATCAGAAACAGAACTGTTCAATGGATAAAGACAAACTACCATCAAAGCCATTGGTTTCCAATTCACACGGTAGAAAAGTTGTGACTGGGGATTCCTCTGGTGGACGTCATAGAAGCTCTAGTAATAAATCCATTGCAAAATCTAAAGTTGGGTCCAAAAAATCATCAATGAATGTGACGGACAGTGAAAAGGAAGTCTTGTATACTCGTACAAACAATTTCCCAAGGAAGAAGAGGTCTACAGACAGGGACTGGAATGATAGGGTTGTAGATAATTTATTCATTAACAAATCACAGAAGCCTGTTCAGTCTAAGCTAGTTAATAATAATAAATACCACGGTGGGGCTGAAGAAGTAAAAAAGAAAGACATGGATGTAGTTTCCTTCACATTTACCACGCCGTTGACAAGGATCACTTCTGGTCTTGAGACATCTGGCCTAAATTCCTTGGATCAGGATATTAGAAGAGTGTTGATTGATACTGAAACTGATAATGCAGGGTCTCCTGTAGGATACAATGCAATTGGTGGTGATGCCTTAGGTATTCTGTTGGATCAGAAGTTGAGAGAGTTAACATATGGAATTGGGAACTCTTGTGATGACTCGCTCAAAGCAAGGTCACCTTCCAGTACTGCACCAAACTCAAAAGATCTGATTCCCACCCTTAATTCAGTTAACCTCTTTCCACGGTTACAACAGAAGAAAGATCAAGACATGATGTTGACAGATAAGTTATTCAGTAACCGTGAATGTGACATTTCCTTCACCTGTCTTCCAGAATTATCATCCAATCATAGGCTTCGGCTTCATAAGATGGAGGAGTGCGAGATCAATCCTTTGGAAGCGGAGTTATTCAATTCTGGACAGCCTAGTCCAATGTCTGTTCTTGACCCTTCTTTTTCTACTGAAAGCTGTGAATCTCCATTCAGCGCAAATGCTACCAGTTCAGAAGACCAAAAAAGGAGGAAGCAAGTTGTGGGGTCAGGAAGTGGCTATACAGACTTGTTTGATTCAGCATCGGCTTGGACCATGCTAAGGAAACAAGCGAGTACATGTTTCCAAATGAAGTTTGGACAATCAAGTACATGGGAGTTAGACTATGTAAATGATATATTGTGTAATGTGGAGTTGATGTACATGGACTTTTCTCTTGGCAGAGCTCGTGACATTGTGAACCCTCATCTGTTCAACCAGTTGGAAAATCGAAGGGGAAGGTTTGAGAGTGATGGTGGTGAGTGTAGAATAAGAAGGAAAGTTATATTTGATTGTGTGAGTGAGTGTTTGGACTTGAAATGCAGGGGTTATGTTGGTGGGGGTTACAAAATGTGGGCAAAAGGGGTTGCAATGGTGAGAAGAAATGAATTGTTGGCAAGGGAAGTGTGGAAGGAAATTTCAAGTTGGAGGGATATGGGGAACTCAATGGTGGATGAACTGGTAGATAGGGACATGAGCATCCAATATGGACGATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGTGCAGTGGTTGAAGACCAAATCTTTGATTCTTTGGTAGATGACTTTGTTGCAGAAATCCTGCAATTGTAA 2883 0.4034 MELHGIYYILQLTAFTFLFVLSIYLKGLLNSALKMRVEKEGAKNEGGHGGGFFHMFDWTSKSRKKLFATMPESLKQRRKVDGNLATMLPYLVDEDGEIGIGGSIRDSGDHSCATSVIDSELCGTRAPGVVARLMGLDSLPSSSFSDPYSTPYFDSQCIQDVQYWRTKLNPLHDHQIVYSGKLVEKAEGTSRNFMEAKPLQSHSRPIEKFQTEVMPPKSAKSIPLTHHKLLSPIKSPGFVPSNNATYIMEAAARIIEPGRQAATKAKTPLVASSSVSLRVRDLKEKVEASQKGQLITSSSLTSRVRDTKGKRESSLRTSSLSEPSQRLTESNDAKYLKGQSSNKSWNGLVDTPVRSSTQVEEDPYSKNKGKSISLAIQAKVNVQRREGLSFSSGRNLVEQREQCDTKNSQKPLKEANVKKSLHMKSSGQDASGVLRQNNQKQNCSMDKDKLPSKPLVSNSHGRKVVTGDSSGGRHRSSSNKSIAKSKVGSKKSSMNVTDSEKEVLYTRTNNFPRKKRSTDRDWNDRVVDNLFINKSQKPVQSKLVNNNKYHGGAEEVKKKDMDVVSFTFTTPLTRITSGLETSGLNSLDQDIRRVLIDTETDNAGSPVGYNAIGGDALGILLDQKLRELTYGIGNSCDDSLKARSPSSTAPNSKDLIPTLNSVNLFPRLQQKKDQDMMLTDKLFSNRECDISFTCLPELSSNHRLRLHKMEECEINPLEAELFNSGQPSPMSVLDPSFSTESCESPFSANATSSEDQKRRKQVVGSGSGYTDLFDSASAWTMLRKQASTCFQMKFGQSSTWELDYVNDILCNVELMYMDFSLGRARDIVNPHLFNQLENRRGRFESDGGECRIRRKVIFDCVSECLDLKCRGYVGGGYKMWAKGVAMVRRNELLAREVWKEISSWRDMGNSMVDELVDRDMSIQYGRWLDFEVDTFQLGAVVEDQIFDSLVDDFVAEILQL* 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00319 960 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 33 956 - -
Lapu3g00319 960 MobiDBLite consensus disorder prediction 399 420 - -
Lapu3g00319 960 Pfam Domain of unknown function (DUF4378) 801 952 IPR025486 -
Lapu3g00319 960 MobiDBLite consensus disorder prediction 316 360 - -
Lapu3g00319 960 MobiDBLite consensus disorder prediction 725 762 - -
Lapu3g00319 960 MobiDBLite consensus disorder prediction 462 500 - -
Lapu3g00319 960 MobiDBLite consensus disorder prediction 397 500 - -
Lapu3g00319 960 MobiDBLite consensus disorder prediction 286 368 - -
Lapu3g00319 960 MobiDBLite consensus disorder prediction 421 445 - -
Lapu3g00319 960 MobiDBLite consensus disorder prediction 725 752 - -
Lapu3g00319 960 Pfam DUF761-associated sequence motif 115 145 IPR032795 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00319 Lapu-Chr3 3175207 3180325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00319 50 958 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 29.456 9.25e-89 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00319 - - gmx:102660038 1394.02