Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00314 ATGCTCCTCCCAACCCACTGTTGCTGCCTCACCACCATCGCCGCGTTAACTATCCTCCTCTCAACCACGTCCTTTTCCGACGCCCAATCCTGTAACGGCATCCTCGTCTCCTACGCATACACCGGCGGCTTGAGGCTGCCGCCTAATGTCTCCGACGCTGCGCAGCAGCCGTACCGCTTCGAGTCGACTTTGACGGTGCTCAACAACGGCCTCGATGAGCTCAAGTCGTGGAAGGTCTTCGTGGGGTTTGACCACGACGAGCTGTTGGTCTCTGCGTCCAATGCGGTGCTCGCCGATGGCACTACTCTCCCCGTCGCCGTCGGTAACGGCACTGTTTTCGCTGGCTACCCCATGACCGATCTCAAGACCGCCGTAGCCACCGCCGGCGACTTGACCCAGATGCAGGCCCAGATCGACCTCGTCGGCACCGTGTTCGGGGTGGCGCCGCCCAGTGTTCCGATGCCGAAATCCATCAACCTCGCCAATGATGGATTCCTCTGTCGTAAATCCACCACCCAAGGGAAGAATGCGAGTAGTGTGTGCTGTACGAGAGATCCCAAGTTCAAAACTAACATTACCACGGATGAAGAGTTTCTGCCACGTCAGAATGGTGATCTTAGCATTATGTATGACGTGATAAGAACTTACGATTCTAATTACTGGGCTGAGGTTACTATTGCAAACCATAACCCACTTGGGAGGCTTGACAACTGGAGGTTGAGCTGGGACTGGATGAATGATGAGTTTATATATTCAATGAAAGGGGCTTATCCTTCTGTTGTGGATGCTTCTGATTGTCTGTTTGGCAAGCAAGGTACATTCTACCGGGATCTTGACTTTGCCAGTGTTTTGAATTGTGAGAGAAGGCCAACCATAATCGATCTCCCTCCCACCAAGTTCAATGATTCTGACCTTGGGAAGATTCCCTTTTGCTGCCGGAATGGTACTATTTTGCCGCCCTCCATGGACCCTAGTATGTCAGCTTCAAGATTCCAAATGCAGGTCTACAAGATGCCACCAGCGCTTAACCGATCGCAACTTTCACCACCGCAGAACTGGAAGATTAGTGGCACACTCAACCCTGACTATAAGTGTGGCCCTCCTGTAAGAGTGAGTCCTACAGAAAACCCTGATCCTTCGGGCTTACCGTCGAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAACATTACAACAGCCAAGGGAACATCAAGTAAATGCTGTGTTTCATTTTCAGCCTATTACAATGACTCAGTTATTCCATGCAAAACGTGTGCTTGTGGATGCCCCAAGAACGCAGAGAGAACATGTAGTACTACTGCTCCAGCTATGTGGCTTCCACCAGAGGCACTTCTTGTTCCTTATGAAAACCGAACGGCCAAGGCCATTGCTTGGGCAAGCCTGAAACATCTTCGAGTGCCAAACCCGATGCCCTGTAGTGATAACTGTGGTGTGAGCATCAACTGGCATTTGTACACAGACTACACTAAAGGATGGAGTGCAAGGGTGACACTTTTTAACTGGGGTGAGACCAATTTTGCCGACTGGTTTGCTGCAGTACAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTACTCTTTCAATGCAACTCTTCTAGATGGTGTAAACAATACAATTATCATGCAAGGTTTGCCAGGATTGAACTACCTTGTAGCAGAAGCCGATGGAGCTGACCCTCTGAGAGATCCTAGGGTGCCTGGTAAACAGCAGTCAGTGATCTCTTTCACAAAGAAACTTACTCCTGGAATCAATATGGCTCGTGGAGATGGTTTTCCCACTAAAGTCTTTTTCAATGGAGAGGAATGTTCCCTTCCTTCCGTGTATCCAAGTAGTGGTGGTTCTTGGGCTGGTTTTTCATTGGGTACTTCTATGCTTCTATCACTGCTGTCGTTCCTCTTGATGCGATGA 1935 0.4972 MLLPTHCCCLTTIAALTILLSTTSFSDAQSCNGILVSYAYTGGLRLPPNVSDAAQQPYRFESTLTVLNNGLDELKSWKVFVGFDHDELLVSASNAVLADGTTLPVAVGNGTVFAGYPMTDLKTAVATAGDLTQMQAQIDLVGTVFGVAPPSVPMPKSINLANDGFLCRKSTTQGKNASSVCCTRDPKFKTNITTDEEFLPRQNGDLSIMYDVIRTYDSNYWAEVTIANHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDASDCLFGKQGTFYRDLDFASVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVYKMPPALNRSQLSPPQNWKISGTLNPDYKCGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKGTSSKCCVSFSAYYNDSVIPCKTCACGCPKNAERTCSTTAPAMWLPPEALLVPYENRTAKAIAWASLKHLRVPNPMPCSDNCGVSINWHLYTDYTKGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNATLLDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKLTPGINMARGDGFPTKVFFNGEECSLPSVYPSSGGSWAGFSLGTSMLLSLLSFLLMR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00314 644 PANTHER COBRA-LIKE PROTEIN 7 25 639 - -
Lapu3g00314 644 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00314 Lapu-Chr3 3131290 3133404 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00314 31 618 COBRA Gene Family AT4G16120 70.389 0.0 892
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00314 - - gmx:100803929 1221.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00314 3 3131290 3133404 Lapu3g00314 3 3131290 3133404 ECH
Lapu3g00314 3 3131290 3133404 Lapu9g00079 9 719305 721330 PCT