Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00290 ATGTGTGTTTCTTATATTACCAAAATTAGCGATCTAAGCCACAGAGCCAGCCAACCAACCGTTCATCAAGAAGACACAACAGCTTCCCGTTCTATCGATTCCAACATCTCATTCTCTTCTCTGCATAAACTCCCTACGCACCATTTTCCCTGTCTCCCTCGGTGCAATTCAGAAATGAATTCCAACTACGGCCAATCCAACACGAACAAGTCCCCCTCGGTTTCCCTCAACAACTTCAATTTCGATTTCGATCTTGGCATTGGATCCAACCGTCCCAAATCCCTCAACGACCAGAAAAACCCCAAACCTTCCTATTCCACCACCACCTCTTCCAATTCCTATCCCTATTCCTCCGCCCAGCCCAACAAACAACCCGCATGGACCCACCAACCCGCTCCCACTCAGACCACTGCCCTGCCAGGTGGCCCCCCCTCCATGGTCGGAGACATCTTCGGCAAGAGCTGGGGAACTACTCAACCTTCTCCCGCTTCCAAAAACATTGGGATCGTTAATAAGAACCCTAATCTCTTCGGAGATTTGGTTAGTTCTGCTTTGGGCCAGGGTTCCAAGTCTTCTGCTACCAATGTTCCTCTCAAAAACGCTACCCCCACCCCCAATAAAACCTCCTTTTCCATGGGAAACATGGCCGATTCTTTGCCCAAAACCAAAACTGGTGCCACGCCACAGAGCACTGCTAGTTGGGCATCATCTTCTGGGGGGTTTAGCGTCAATGCCAACGAAACCCCCAATCTTGGGGGTACTTCAATGCGAAACATGGGTACTGGAATTGGACCCAGTTCTAATAACAAGGATCCGTTTAGTTCTTTGTCAGGTTTTGGATCGAAGCAATCTTCTACTCTTAATTCAGCTGCCAAAGGGCCAAAGGTTGCATCCGGGGATGATGGTTTTGGAGATTTTCAAAATGCTTCAAAACCGAACTCAGCCGCGTTTCCATCGGCTGCTTCTCCTGGGATTGATATCAATTTTGCGGGATCTGCTGCTTCCACTCAGAGTCCTGTTCAGGGATCAGGTGGTGGTGATGATCCAATGGACATGTTTTTCAAAGCGGCTTCCTCGACCGCGGTTGGAGGTGCTGCTGCGGCCTCCGATGGATTTGGAGGACAGGATGACTGGGGTTTTGATTCGGAGTTTGGTGGGGGAGGCCATGATGTGGGTGGCAGCACTACTGAACTCGAGGGGCTGCCTCCTCCTCCTGCTGGGGTGTCCGGTTCCACTGCAAAAGGCAAGGGGATGGACAATTACAAGCAGGGACAGTTTGCTGATGCTATTAAGTGGCTTTCGTGGGCCATTGTTCTTCTAGAGAAATCTGGGGATGGTACTGCCACGGTTGAGGTTTTGTCATGCAGGGCTTCGTGTTACAAAGAAGTTGGGGAGTATAAAAAGGCGGTGGCAGATTGTACAAAGATTCTTCAAAATGATGAAACCAATGTATCTGTCCTGGTACAGCGTGCTCTCTTGTACGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTTAGGACTGTGCTGAAGATTGATCCTAGTAATAGGATTGCTAGAAGCACCGTTCACCGGTTGGCTAAGATGGCTGATTAG 1599 0.4941 MCVSYITKISDLSHRASQPTVHQEDTTASRSIDSNISFSSLHKLPTHHFPCLPRCNSEMNSNYGQSNTNKSPSVSLNNFNFDFDLGIGSNRPKSLNDQKNPKPSYSTTTSSNSYPYSSAQPNKQPAWTHQPAPTQTTALPGGPPSMVGDIFGKSWGTTQPSPASKNIGIVNKNPNLFGDLVSSALGQGSKSSATNVPLKNATPTPNKTSFSMGNMADSLPKTKTGATPQSTASWASSSGGFSVNANETPNLGGTSMRNMGTGIGPSSNNKDPFSSLSGFGSKQSSTLNSAAKGPKVASGDDGFGDFQNASKPNSAAFPSAASPGIDINFAGSAASTQSPVQGSGGGDDPMDMFFKAASSTAVGGAAAASDGFGGQDDWGFDSEFGGGGHDVGGSTTELEGLPPPPAGVSGSTAKGKGMDNYKQGQFADAIKWLSWAIVLLEKSGDGTATVEVLSCRASCYKEVGEYKKAVADCTKILQNDETNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTVHRLAKMAD* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00290 532 MobiDBLite consensus disorder prediction 329 343 - -
Lapu3g00290 532 MobiDBLite consensus disorder prediction 188 351 - -
Lapu3g00290 532 PANTHER OS03G0340700 PROTEIN 59 532 - -
Lapu3g00290 532 Gene3D Tetratricopeptide repeat domain 410 531 IPR011990 GO:0005515
Lapu3g00290 532 SMART tpr_5 450 483 IPR019734 GO:0005515
Lapu3g00290 532 SMART tpr_5 410 443 IPR019734 GO:0005515
Lapu3g00290 532 SMART tpr_5 484 517 IPR019734 GO:0005515
Lapu3g00290 532 ProSiteProfiles TPR repeat profile. 484 517 IPR019734 GO:0005515
Lapu3g00290 532 MobiDBLite consensus disorder prediction 377 415 - -
Lapu3g00290 532 MobiDBLite consensus disorder prediction 91 141 - -
Lapu3g00290 532 MobiDBLite consensus disorder prediction 188 292 - -
Lapu3g00290 532 MobiDBLite consensus disorder prediction 89 143 - -
Lapu3g00290 532 SUPERFAMILY TPR-like 414 522 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00290 425 527 Calmodulin-binding Proteins AT3G25230 29.245 1.88e-08 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00290 - - pvu:PHAVU_003G107800g 848.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00290 3 2947941 2953112 Lapu3g00290 3 2947941 2953112 ECH