Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00272 ATGGGTGGCCAGATGCAGCAGAGCAATGCGGCCGCCACTGCTCTGTATGACCGCGCCGGCGCCGGATCCCTCCACAATGCGACGGGGCCGGCCACTGATGCCGGCGACGCTGTCATGGCGCGCTGGTTACAATCCGCCGGTTTGCAGCATCTGGCCTCTCCATTGGCTTCCACTGGTATCGATCAACGCCTCCTCCCCAATCTTCTTATGCAGGGTTATGGAGCGCAGTCTGCAGAAGAAAAGCAGAGGCTTTTTAAGTTAATGAGAAACCTCAATTTTAATGGGGAATCAGGTTCTGAGCCATATACGCCCACTTCCCAAAATTTAGGTGGAGTGGCTGTATCAGATGGGTTTTATTCTCCGGACTTCAGGGGAGATTTTGGAGCCGGGCTTCTTGATCTTCATGCTATGGATGATACAGAGCTTTTGTCCGAGCATGTTATTTCAGAACCCTTTGAGCCATCACCCTTTATCCCTGGAGGCGCTAGAGTTTTTGAAGATGACTTCAATCCAATTAGCAGAAAGCACGAAACAGGAGAAGTAGATGCTGATGCATCAGTTTTCTTACCTACAAATGAAAAAGAGAATAATACCAGAGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGCAAAAGACCTTTAAATAAGAAGGAGCTTGCTAAGAAGGAGGATGATATTGTAACTGTATATGACAATGCATATTTGGCAGTACATGAACCGAAACTAAAGGTGGATTTGACAGCTTATGTGGAGAAGCATGAGTTCTGTTTCGATGCTGTTCTTGACGAGAATGTTACCAATGATGAAGTTTATCGAGTTACAGTAGAACCAATTATTCCTACAATTTTTGAGAGAACCAAAGCTACTTGTTTTGCTTATGGTCAAACAGGAAGTGGCAAAACATACACGATGCAACCATTGCCGCTCAGGGCTGCAGAAGACCTTGTTAGACAGTTGCATCGACCAATATATCGAAACCAGAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTTTTTGATCTTCTAAGTGACAGAAAAAAACTCTGCATGAGAGAAGATGGACGGCAGCAAGTGTGTATTGTAGGACTGCAAGAATTTGAAGTGTCTGATGTACAGATTGTCAAAGAATTCATCGAAAAGGGGAATGCAGCAAGAAGTACAGGGTCAACTGGTGCAAATGAAGAGTCCTCCAGGTCACATGCTATCTTGCAACTTGTTGTAAAGAGGCACAATGAGATAAAAGAGAGCAGGCGGAATAACAATGATGGAAATGAGGCAAAAAGTGGAAAGGTTGTGGGGAAGATATCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGACAATGACCGTCAGACAAGAATCGAAGGTGCTGAAATCAACAAGAGTCTTTTGGCTTTGAAGGAGTGCATCCGTGCTTTGGATAATGATCAGATCCATATTCCTTTTCGGGGAAGCAAACTTACAGAAGTGCTCCGTGACTCCTTTGTTGGAAATTCAAAAACTGTTATGATCTCTTGTATATCCCCAAATGCCGGGTCTTGTGAACACACACTTAATACCTTGAGATATGCAGACCGAGTTAAAAGTCTATCCAAGAGTGGAAATCCTAGGAAGGACCTGGCCCCAAATCCAGCACCACCAGCCAATAAAGAGGTTTCATCCACATCTTCACTTCCTGCTAGCATGGGTGCAGAGGATTTTAATGGTCAACGTCAAGAGGTAAAAGCAATGGACTTGGGCAGAAAAGTTGTCGAAAAGGAAAGTTCTTTGTACAGCTCTTCCACTGATGTTGACAAACAACTATCAAGTTTCTCTTCTAGTTATTCATACAATGTGCAAGAGGAGAAAAGCTTGGCTTCTGCTCCAACGGGCAGGGAAAGGCTTGAAGTAAAGAATTCTTACAGTGATTCCACCAGTCAAAAGATGAACTCTTATTCCCTGAATGTTACAGATGAGAAAGTGCAGAGGGTGTCCCCCCCACGCAGAAAAGGAACAAAGGAGGAGAAATCCGAAAGATCTATAAATTGGGTAAAAAGGGATGCCAATGGCTCTAACAATTTCACCACGAGCTCCAAACAGCAGAACACAGGAAATTATAACACAGTTACCACTGGATTGGGGCAACCTGAAACAGAATCCTCTTCTGACGTGAATATCAGTGCAATACTTGAGGAGGAAGAAGCATTAATTGCTGCTCATAGGAAAGAAATTGAGGACACGATGGAGATTGTTCGGGAAGAAATGAAACTATTGGCAGAAGTGGACCAGCCAGGAAGTCTAATTGACAATTACGTAACTCAGTTGAGTTTTGTGCTTTCTCGCAAAGCAGCTAGTCTGGTCAGTCTTCAAGCTCGCCTCGCAAGATTTCAACATCGACTAAAAGAACAAGAGATACTAAGTAGAAAAAGAGTACCCCGTTAA 2451 0.4341 MGGQMQQSNAAATALYDRAGAGSLHNATGPATDAGDAVMARWLQSAGLQHLASPLASTGIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTSQNLGGVAVSDGFYSPDFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFIPGGARVFEDDFNPISRKHETGEVDADASVFLPTNEKENNTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTVYDNAYLAVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYRVTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLHRPIYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEIKESRRNNNDGNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRIEGAEINKSLLALKECIRALDNDQIHIPFRGSKLTEVLRDSFVGNSKTVMISCISPNAGSCEHTLNTLRYADRVKSLSKSGNPRKDLAPNPAPPANKEVSSTSSLPASMGAEDFNGQRQEVKAMDLGRKVVEKESSLYSSSTDVDKQLSSFSSSYSYNVQEEKSLASAPTGRERLEVKNSYSDSTSQKMNSYSLNVTDEKVQRVSPPRRKGTKEEKSERSINWVKRDANGSNNFTTSSKQQNTGNYNTVTTGLGQPETESSSDVNISAILEEEEALIAAHRKEIEDTMEIVREEMKLLAEVDQPGSLIDNYVTQLSFVLSRKAASLVSLQARLARFQHRLKEQEILSRKRVPR* 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00272 816 PANTHER KINESIN-RELATED PROTEIN 6 32 814 IPR027640 GO:0003777|GO:0007018
Lapu3g00272 816 Coils Coil 789 809 - -
Lapu3g00272 816 MobiDBLite consensus disorder prediction 558 573 - -
Lapu3g00272 816 CDD KISc_KIF2_like 205 538 - -
Lapu3g00272 816 MobiDBLite consensus disorder prediction 690 709 - -
Lapu3g00272 816 MobiDBLite consensus disorder prediction 621 685 - -
Lapu3g00272 816 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 540 IPR027417 -
Lapu3g00272 816 Gene3D Kinesin motor domain 184 543 IPR036961 -
Lapu3g00272 816 MobiDBLite consensus disorder prediction 540 579 - -
Lapu3g00272 816 FunFam Kinesin-like protein 184 543 - -
Lapu3g00272 816 SMART kinesin_4 203 546 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g00272 816 MobiDBLite consensus disorder prediction 665 685 - -
Lapu3g00272 816 Coils Coil 733 764 - -
Lapu3g00272 816 ProSitePatterns Kinesin motor domain signature. 439 450 IPR019821 GO:0003777|GO:0005524|GO:0007018
Lapu3g00272 816 ProSiteProfiles Kinesin motor domain profile. 205 540 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g00272 816 MobiDBLite consensus disorder prediction 643 663 - -
Lapu3g00272 816 Pfam Kinesin motor domain 211 539 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g00272 816 PRINTS Kinesin heavy chain signature 440 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g00272 816 PRINTS Kinesin heavy chain signature 490 511 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g00272 816 PRINTS Kinesin heavy chain signature 396 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lapu3g00272 816 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00272 Lapu-Chr3 2806024 2815417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00272 197 540 Calmodulin-binding Proteins AT5G65930 33.708 7.82e-42 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00272 K10393 - gmx:100778915 1461.43