Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00266 ATGGAGGATTCGTTAGGGCAAAAATGGAAGCACCGAGAGTTCGCTTTGGCATCAGTTTCCGACCTATCTTCCGCTCCTCCTTCCGCTTCGCCGGGTATCGCTCGCTTCGACTCCGACGGTCTCCAAATTCATCAGCAATCTCACCAGATTCCACTCAGTGTCGATCCTCGAACTGTTCAGTTATTCAAGCTGAGTCCTGTTCAATCCGTTTGCGTGGTGGAAGGATCTGATGTCGGTAAAAAGGCGTTGTATTCCAAGGGAGTCACTATCCAGTTTAAAAGTGAGGAGGACAGTGCAGCCTTCCATTGTGTTGTCCAACAATGGAAGAAGGAAGTCAATGCTCAAGGAGGAAATGGGCGAAATGGAACTATTACGACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCGTCATCTGCAAAAATGTATTTTCATTATTATGGACAACTTCTGCATCAGCAAAATATGTTACAGGACTACGTGCGGACAGGGACCTATCATGCTGCTGTTATTGAGAACCGATCTGATTTTGCTGGTCGCGTTGTAGTTGATGTGGGTGCTGGTAGTGGTATTTTATCACTGTTTGCTGCTCAGGCTGGTGCAAAACATGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCTGGAAACCCAGCACTAGCTCAACGAATTACTGTGATCAAAGGCAAAGTTGAGGATGTTGAATTGCCAGAGAAAGCAGATATTCTGATATCTGAACCCATGGGCACCTTGTTAGTCAATGAAAGAATGCTGGAGTCTTATGTCATTGCCAGAGATAGGTTTCTTGTTCCTACTGGAAAAATGTTTCCAGCTTTGGGAAGGATTCACATGGCACCTTTTACTGATGAATATTTGTTTATAGAAATTGCTAATAAGGCACTGTTTTGGCAGCAAGAAAACTATTATGGCGTAGATTTAACACCCCTACATGGGACTGCATTTCAAGGATACTTTTCTCAGCCCGTGGTGGATGCTTTTGATCCAAGACTGTTAATAGCTCCTTCAATGTTCCATGTCATCGACTTCACTAAAATAAAGGAGGAAGAGCTCTATGAAATTGATATTCCTCTCAAATTCATAGCGTCTGTGGGTACCAGAGTGCATGGGTTAGCATGTTGGTTTGATGTGCTGTTCAATGGGAGTACTGTGCAAAGGTGGCTTACTACTGCTCCTGGGTCGCCAACAACCCATTGGTACCAGTTACGTTGTGTTCTCTCACAGCCAATATATGTCATGGCTGGACAAGAAATTACCGGCAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATATATTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGAGGAATTCTCCAAACATCTTCCTGTAAACTTGATCTGAAAGAACCCTATTATAGAATGTCTCAACCACAGGCTTATGCATTTGCTCAAGATCAACAATCTCAACCACTTATACCAACGCAGGATATACCTATTCAATCTCAGGATTTAGACGAACCTGAAATAGTACAACAACCTCCGCCTAATTCATGTGTCCAGATTGATTCACTGATGCAGAATATTTAA 1608 0.4285 MEDSLGQKWKHREFALASVSDLSSAPPSASPGIARFDSDGLQIHQQSHQIPLSVDPRTVQLFKLSPVQSVCVVEGSDVGKKALYSKGVTIQFKSEEDSAAFHCVVQQWKKEVNAQGGNGRNGTITTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYHAAVIENRSDFAGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPALAQRITVIKGKVEDVELPEKADILISEPMGTLLVNERMLESYVIARDRFLVPTGKMFPALGRIHMAPFTDEYLFIEIANKALFWQQENYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSMFHVIDFTKIKEEELYEIDIPLKFIASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYAFAQDQQSQPLIPTQDIPIQSQDLDEPEIVQQPPPNSCVQIDSLMQNI* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00266 535 Pfam Ribosomal protein L11 methyltransferase (PrmA) 178 252 - -
Lapu3g00266 535 FunFam Probable histone-arginine methyltransferase CARM1 285 493 - -
Lapu3g00266 535 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 100 466 IPR025799 GO:0016274|GO:0018216
Lapu3g00266 535 Gene3D Vaccinia Virus protein VP39 121 283 IPR029063 -
Lapu3g00266 535 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 146 457 IPR029063 -
Lapu3g00266 535 CDD AdoMet_MTases 182 282 - -
Lapu3g00266 535 Gene3D - 285 493 - -
Lapu3g00266 535 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 136 451 IPR025799 GO:0016274|GO:0018216
Lapu3g00266 535 FunFam Probable histone-arginine methyltransferase CARM1 123 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00266 Lapu-Chr3 2747873 2754445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00266 143 433 C2H2 Transcription Factor Family AT3G12270 33.981 1.87e-38 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00266 K05931 - gmx:100780736 1002.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00266 3 2747873 2754445 Lapu9g00122 9 1126618 1135097 PCT