Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00261 ATGCAATTTCATTGTGATACGGATTCTCCACTTGTTGCCGCACACGCACACACGCACGCAAAACGCAACCAAATATATTTTCTTTCTCTGCCCTTTCGGGATTTGCTAAGTCACACACTCTCTTGTATATATACTCACACTCTCACTCACTCCTTTCTCTCTACCTCTATTCTCATTTCTGTCATACCCGCATTCTCAGAATTCCCCCTTTCTCTTTGCCTTCACTCTTCACTGCCCCTTCCCTCTATTGGGTTGCTCACTGCGCAGGGTATAATGCTTAGTCCTGAAGGAGAACTTAAAATAAGTTTTGGCTATAAATGCAACAGTGATAGAGGTATTCCTTATGAGGTTGCCAGTGGCTGCAAAATCCTTCCTGGAGTACGTAGAACAAGTAGTTTCTCTTGCTTGTCAGGTGCAGCTTTAAGTGCAAATGCTACATTAGCCAACACAAACATCTGCAATGGTAAAATAGGTGAAGAAATACTTCCAAGTTGGGACTCTCCTAATTCATTTCGTAAGGTAACCTCTTCGCCGAGTCTTTCAAAGTTGGACATACTATCATCTTCCCTCCCAAGTAGTTTGTCTTACCTTAGCTGCAGTCCTTCTACTACAAGTGACATCCTTGAATATGACTCTTGCACATTAAAATCCATGAGCGATCCTTCCAGAAGTGAAGGTTTTCTTAATGTTAAAGAATTTCAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAAAATGGGTGGCTCTTCTGTGCAATTTATGATGGCTTTAACGGAAGAGATGCAGCCGATTTTCTGGCCGGTACCCTGTATGACACCATCATATCGTACTTTAATAAGTTAATCGAGGAATTGGAGCCAGGTTCCATGGAAGCTTATAATGATGGGGGGTTGGGTGAATCCCTGCAATGTAAGTTGAATGACAGTCTTATTTATCACGAGGATCCATCTATGGCAAGATTTAAAGGAATAAATGATTCTAATCATGGATGTTTTGCAAAGTTTGGTCTATTTTCACAAGGGGTACTTGATATCCTTGAACGTGCTATTAGTCAGGCAGAGAGTGATTTCCTTTACATGGTGGAGCGGGAAATGGAGGAACGTCCTGATCTAGTTTCTATTGGATCTTGTGTTTTACTAGTGCTTCTTCATGGTAATGATTTGTATACACTTAATCTAGGTGATAGCAGAGCAGTGTTGGCAACTTGCACTAGAGGTTACCGAATGGACAAGAGTGAGAGACTGAAGGCTATACAGCTTACAGATAATCACACTGTTGATAATGAAGTTGAAAGAGCTAGACTTCTGGCCGATCATCCCGATGATCCCAGGATCGTTATAGCAGGAAAAGTGAAAGGGAAACTGAAGGTTACTCGCGCTTTTGGAGTTGGCTACTTGAAAAAGAAAAATTTGAATGATGCTTTGATGGGAATCCTTCGAGTTCGTGATCTTAAAAGCCCACCATACATATCCACTCAACCATCACTGAATGTCCACAGAATCTCAAGTTCCGATCAATTTGTTATAGTAGGGAGTGATGGTTTATTTGACTTCTTCAGCAATGATGAGGCAGTAAAGCTTGTAGAGTCTTATATCTTAAGCACCCCTTTTGGTGATCCAGCAAAGTTTCTCATAGAGCAGCTTGTGGCTAGAGCAGCTGTTTCTGCCGGTCATTTTTCCATATCTTATGCTAAATTGAATTTTATTTTCATCAATATAGATGTTGCTTGTTTTATTATATGA 1764 0.4093 MQFHCDTDSPLVAAHAHTHAKRNQIYFLSLPFRDLLSHTLSCIYTHTLTHSFLSTSILISVIPAFSEFPLSLCLHSSLPLPSIGLLTAQGIMLSPEGELKISFGYKCNSDRGIPYEVASGCKILPGVRRTSSFSCLSGAALSANATLANTNICNGKIGEEILPSWDSPNSFRKVTSSPSLSKLDILSSSLPSSLSYLSCSPSTTSDILEYDSCTLKSMSDPSRSEGFLNVKEFQVAGGAAGEDRVQAVCSEENGWLFCAIYDGFNGRDAADFLAGTLYDTIISYFNKLIEELEPGSMEAYNDGGLGESLQCKLNDSLIYHEDPSMARFKGINDSNHGCFAKFGLFSQGVLDILERAISQAESDFLYMVEREMEERPDLVSIGSCVLLVLLHGNDLYTLNLGDSRAVLATCTRGYRMDKSERLKAIQLTDNHTVDNEVERARLLADHPDDPRIVIAGKVKGKLKVTRAFGVGYLKKKNLNDALMGILRVRDLKSPPYISTQPSLNVHRISSSDQFVIVGSDGLFDFFSNDEAVKLVESYILSTPFGDPAKFLIEQLVARAAVSAGHFSISYAKLNFIFINIDVACFII* 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00261 587 CDD PP2Cc 240 560 IPR001932 -
Lapu3g00261 587 ProSiteProfiles PPM-type phosphatase domain profile. 227 587 IPR001932 -
Lapu3g00261 587 Gene3D - 197 570 IPR036457 -
Lapu3g00261 587 SUPERFAMILY PP2C-like 241 558 IPR036457 -
Lapu3g00261 587 Pfam Protein phosphatase 2C 362 547 IPR001932 -
Lapu3g00261 587 SMART PP2C_4 221 573 IPR001932 -
Lapu3g00261 587 PANTHER PROTEIN PHOSPHATASE 2C 235 558 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00261 Lapu-Chr3 2718183 2722433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00261 95 564 PP2C-type Phosphatase Gene Family AT3G16560 62.605 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00261 - - vun:114178627 951.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00261 3 2718183 2722433 Lapu9g00128 9 1152101 1155896 PCT