Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00222 ATGGCTGCTGGAGCAATGTTCCAGAAACTGACGACAGTGATGACCTCTGATCATGCTTCCGTTGTCTCTATGAACATTTTTGTTGCACTTCTGAGTGCTTGCATCATCATCGGTCATTTGTTGGAGGAGAACCGATGGATCAATGAATCCATCACTGCCCTTCTAATTGGTCTTTGTACTGGGGTCTTTATACTGCTTACTACCGGAGGAAAAAGCTCTCATATACTAGTCTTCAGTGAAGATCTTTTCTTCATTTACCTTCTCCCACCCATCATTTTCAATGCCGGGTTCCAGGTGAAGAAGAAACAATTTTTCCGCAATTTTATGACTATTATGCTCTTTGGTGCAGTCGGTACTTTGATATCATTCTGCATCATATCACTGGGTGCCATACATTTTTTTCAGAAGTTGGACATTGGTTCCCTCAAGATTGGAGATTTTCTAGCACTTGGAGCAATATTTTCAGCAACAGATTCAGTTTGCACGTTGCAGGTTCTTAATCAGGATGAGACTCCTTTACTATATAGCCTGGTGTTTGGGGAGGGGGTAGTAAATGACGCCACCTCTGTAGTACTCTTCAAAGCAATTCAGAATTTTGATCTCTCTCACATTGACTTGAGTACTGCGTTGCAGTTAATAGGAAATTTTTTATATTTATTCATTGCAAGCACTGTGTTGGGAATCTTTGCGGGATTGCTTAGTGCTTACATTATCAAAAAGCTGTATTTTGGCAAGCTAATAAGGCATTCTACAGACCGTGAGGTTGCTCTCATGGTACTCATGGCATACCTTTCATATATGCTAGCTGAACTATTTTCTTTGAGTGCCATTCTGACTGTTTTCTTCTGCGGCATTGTTATGTCTCACTACACGTGGCATAATGTAACTGAAAGTTCAAGAGTGACAACAAAGCATGTTTTTGCCACTTTGTCCTTCATTGCTGAAATCTTCATCTTCCTCTATGTGGGGATGGATGCGTTAGATATAGAAAAGTGGCGAATTGTAAGTCAAAGCCCAAGAAAATCTATTGGGGTCAGTTCGTTGCTGTTGGCACTTATCCTAGTGGGAAGAGCTGCATTTGTTTTCCCTTTGTCCTTCTTATCCAACTTGCTTAAGAAGTCTCAATCTGAGAAAATTGAGTTAAAGCAACAAGTAACAATTTGGTGGGCTGGTCTCATGCGTGGAGCTGTTTCCATCGCACTTGCTTACAATCAGTTTACCAGGTTGGGCCATACTAAATTGCGCGAGAATGCCATCATGATCACTAGTACCATCACTGTTGTACTCTTCAGCACATTGGCATTTGGGTTGATGACAAAGCCACTTGTGAGGCTATTGCTTCCTTCCTCTAAGCATGTGATGAGCTTGCCGTCCCCACCATCGACACCAAAATCATTCACAGTGCCACTTCTTGGCAGTGGAAGAGAGGATTCATCATGGACCAATGGTGGCACCCAAAATGGGCCTCCTCCAACCACCTTTAGGATGCTACTAAGCTGCATTCCTACTCGTGGGGTGCACCACTATTGGCGCAAGTTTGATGATTCTGTCATGCGACCAGTGTTTGGTGGACGAGGCTTTGTGCCCTACATTCCCGGGTCACCCCTTGAACAAAGTGTTCATCAGTGGCATGGCAGTTAG 1641 0.4321 MAAGAMFQKLTTVMTSDHASVVSMNIFVALLSACIIIGHLLEENRWINESITALLIGLCTGVFILLTTGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFCIISLGAIHFFQKLDIGSLKIGDFLALGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLSTALQLIGNFLYLFIASTVLGIFAGLLSAYIIKKLYFGKLIRHSTDREVALMVLMAYLSYMLAELFSLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHVFATLSFIAEIFIFLYVGMDALDIEKWRIVSQSPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLLKKSQSEKIELKQQVTIWWAGLMRGAVSIALAYNQFTRLGHTKLRENAIMITSTITVVLFSTLAFGLMTKPLVRLLLPSSKHVMSLPSPPSTPKSFTVPLLGSGREDSSWTNGGTQNGPPPTTFRMLLSCIPTRGVHHYWRKFDDSVMRPVFGGRGFVPYIPGSPLEQSVHQWHGS* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00222 546 Pfam Sodium/hydrogen exchanger family 28 444 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Lapu3g00222 546 Gene3D - 143 195 - -
Lapu3g00222 546 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu3g00222 546 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu3g00222 546 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu3g00222 546 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lapu3g00222 546 Coils Coil 364 384 - -
Lapu3g00222 546 PANTHER SODIUM/HYDROGEN EXCHANGER 15 522 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00222 Lapu-Chr3 2335927 2363300 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00222 9 542 Antiporters AT3G05030 74.115 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00222 - - ccaj:109808409 1016.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00222 3 2335927 2363300 Lapu3g00222 3 2335927 2363300 ECH