Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00195 ATGGCCTCTCCTCCTCCTCCCCCGACCCCCTCCGCCGTCCCCCTAGCCCTCCTCCCCTCCCCTCCCCGCGCCCCCTCCTCTCGCCGCCTCCCTCCGCCCTGCTGGTCACCCGATGAAACCCTTGCACTCATCGACGCCTACCGAGACAAATGGTACTCCCTCGGCCGCGGCAACCTCAAGGCCACCCACTGGCAAGAGGTCGCCGACGCCGTCGCCAACCGCTGCCCCAACGCCTCCCCTCCCAAAACCCCCGTCCAGTGCCGCCACAAAATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAACGCGCTCGCTCCCTCCCCGTTTCCCGATTCAATTCCTCCTGGGTCCACTTTAAGCTCATGGACTCCATGGAGAAAGGCCCCTCTCCTGTCAAACCCGAACACGATTCCGATAGTGAGAACGATGACGACGACAACGACGATGATCAGGATCTGTACCAGGAGATCAATCACAATGGCCACACCCGGAGCCTGAACAAGTTGTACAGGAACGGTTTTCCTGGTGCCGGTGCTGGTGCCGGTGGGTTTAGGATTCGAATTCCCACCGGGATGGGCGCGGCTCAAGCCGGATCTGGCTCCAAGGTGTTTGGAAAGATTGGGAATCAGAAATTCAGCGCTAATTTGAATCAAAACCCTAACTCTAGTTTTGGAAAGAAGAGAGATAGAGACCCGGTGGGGGAGGTGGTGGCTGCGATCAAGGTTTTAGGAGATGGGTTTGTGAGAATGGAACAGATGAAGATGGAGATGGCCAGGGAGATTGAGACCATGCGGATGGAGATGGAAATGAAGCGCACTGAGATGATTCTGGAGTCACAACAACGGATTGTTGAGGCCTTTGCCAAGGCCGTTTCAGAAAAGAAGAAGGTCAAGACTGTGTCTTCCCCGCAGCAGCCCTAA 924 0.5758 MASPPPPPTPSAVPLALLPSPPRAPSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVANRCPNASPPKTPVQCRHKMEKLRKRYRTEIQRARSLPVSRFNSSWVHFKLMDSMEKGPSPVKPEHDSDSENDDDDNDDDQDLYQEINHNGHTRSLNKLYRNGFPGAGAGAGGFRIRIPTGMGAAQAGSGSKVFGKIGNQKFSANLNQNPNSSFGKKRDRDPVGEVVAAIKVLGDGFVRMEQMKMEMAREIETMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKKVKTVSSPQQP* 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00195 307 SMART 118neu2 42 131 IPR006578 -
Lapu3g00195 307 ProSiteProfiles Myb-like domain profile. 35 95 IPR001005 -
Lapu3g00195 307 MobiDBLite consensus disorder prediction 1 32 - -
Lapu3g00195 307 Coils Coil 88 108 - -
Lapu3g00195 307 Gene3D - 35 100 - -
Lapu3g00195 307 Pfam Myb/SANT-like DNA-binding domain 33 126 IPR044822 -
Lapu3g00195 307 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 11 293 IPR044823 -
Lapu3g00195 307 MobiDBLite consensus disorder prediction 126 155 - -
Lapu3g00195 307 FunFam Trihelix transcription factor ASIL2 35 100 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00195 10 126 Trihelix Transcription Factor Family AT3G14180 34.400 1.22e-17 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lapu3g00195 Myb_DNA-bind_4 2e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00195 - - vun:114179736 478.404