Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00157 ATGATGTCATTGGTGAAATACTCAGCATGGCCTCTGACCAACCCTGCTTCCTCTAGTCACGTTCCAAGGCCTAAATTCTGCACGTTACCTTCTACCCACAATGTTCAACACAGCCCCCGGCCCTCTCTCTCTTCCCTCAAACCTCTTCACATTTCATCCGCTGAGAACTTTGCTTCGTCGGCAAAACTCGGAAGGAGGGTCACGGAGTGTCAGGCCTATGAAGCAGATAGGTCACGGCCACTAGAGCTTAACATTGAGCTTTCTGACGAACAAGCAGGGATAGAAGCAACCCAGAGGCTGAAAATTGGTTTTTATTTTGCCACCTGGTGGGCTTTAAATGTGGTCTTCAACATATACAATAAGAAGGTTCTGAATGCCTTTCCTTACCCCTGGCTTATTTCCACTTTGTCCCTTGCTGCTGGCTCTCTCATGATGTTAATCTCATGGGCCACAAGGGTTGCTGATGTTCCAAGAGTTAATCTCGAGTTCTGGAAGGCCCTCTTTCCTGTTGCTGTGGCTCACACAATTGGGCATGTTGCAGCTACCGTGAGTATGTCCAAAGTTGCAGTTTCATTCACCCACATAATCAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTATCAAGGTTCTTGCTAGGGGAAGCATTCCCTGTGCCGGTTTACCTGTCACTGGTGCCAATTATAGGAGGTTGCGCACTTGCTGCTGTGACGGAACTCAATTTCAATATGATTGGATTTATGGGCGCTATGATATCCAATTTGGCCTTTGTCTTTCGGAATATATTCTCAAAGAAGGGAATGAAAGGGATGTCTGTTAGTGGAATGAATTACTATGCTTGTCTTTCCATATTATCTCTATTGATTCTCACACCTTTAGCCATTGCTGTGGAGGGCCCAAAGTTGTGGGCTGCAGGCTGGCAAACAGCCTTGTCTCAGATTGGTCCCCATTTTGTCTGGTGGGTAGCTGCTCAGAGTGTCTTTTATCACTTGTACAATCAAGTATCTTACATGTCTCTTGATCAGATTTCTCCCTTAACATTTAGCATAGGGAACACAATGAAGAGAATTTCGGTAATTGTTACTTCTATACTTATCTTCCACACACCAATTCAGCCTGTCAATGCTCTTGGGGCAGCCATTGCAATTCTTGGTACCTTCCTCTATTCACAGCTTTCATCTAAAGAAAACTTAAATGTTCTTGCTTTGTGTTCTTTGTGA 1218 0.4499 MMSLVKYSAWPLTNPASSSHVPRPKFCTLPSTHNVQHSPRPSLSSLKPLHISSAENFASSAKLGRRVTECQAYEADRSRPLELNIELSDEQAGIEATQRLKIGFYFATWWALNVVFNIYNKKVLNAFPYPWLISTLSLAAGSLMMLISWATRVADVPRVNLEFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPVPVYLSLVPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPLAIAVEGPKLWAAGWQTALSQIGPHFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSIGNTMKRISVIVTSILIFHTPIQPVNALGAAIAILGTFLYSQLSSKENLNVLALCSL* 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00157 405 PANTHER SOLUTE CARRIER FAMILY 35 101 392 - -
Lapu3g00157 405 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 100 394 IPR004696 GO:0016020|GO:0022857|GO:0055085
Lapu3g00157 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 142 236 - -
Lapu3g00157 405 SUPERFAMILY Multidrug resistance efflux transporter EmrE 293 391 - -
Lapu3g00157 405 Pfam Triose-phosphate Transporter family 100 389 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00157 Lapu-Chr3 1782896 1786286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00157 43 394 Antiporters AT1G61800 81.534 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00157 K15283 K05350 gmx:100820126 671.389