Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00149 ATGAGCTTGTATTTCAGCCTCGCAGCTTGTAAAGAGATCTTCCTACAAATGAATCGCGTCGCCAAGACAATTGACGAAGGAAGACTGAATATGAAGGCGCATTGCCCTATAGTAACTGATGTCGGGTTGAAGGATAAGGCCACGAGAATTCTAATGTGTTATAATTCAACTTGGTTGCGAATTGGACTGTTTGTAATTTTTGGCGGTGACTCCTTGGTGTTAAATGGCGATGTGGATTCTGATCATGATGCTGTGTTCTTGAGAATGGTCGTTGACAAACTATTTTTTTCGCATGAGGGTTTAGCTAAAGAGTATGCTTATAACAAAATGGTTGAAGGTGTGTACAGGACAGGTTACTATGAGAATTTGGGGAATGTGATATTGAAAAGAATTTTGTTGCTTGTACTTGTTCTGGATAAAGCTAAATGCCAGAGTTACCTTCCACTGGAGTATGGTATTGATGGATTGGATGGGGGTTCTCCTTTGTTATTCAAACCAGAATCCTGGATTAAATCAAGCAGTCAGCTGATTCATGAATTTCTATCGTCTGATGTAATGCATGGAGAAGGCAATCTTCTAACACATTTGGTGATTTTAGGTTACAAAGTATCTCATCAACAGGAACCTCTTGTCGAGTATGATTTCAGGATCAGAGATTTGTTTGTAGATCTTCAAGATGGATTAAAACTGTGTAGAGCTGTTCAGCTCTTGCAGCATAATTCTTCGATCCTCATGAAAATCATAGTTCCCTCTGATACTCCTAAGAAAAAGTTATCAAACTGCAGTCTTGCCCTGCAATATATTAGGCAAGCTGGTGGGTCACTACTTGATGAAGATGGCATGATGATTGTGGCAGATGATATTGCTAATGGAGACAAAGAACTTACACTTTCCTTGCTCTGGAATATGTTTGTTCATTTGCAGCTACCTCTTTTAGTTGACAAAACAAGTTTAGAAGGGGAAATTTCTAAAATTCGAGGAGGCACGGGTCTCGTAAACAATGCAAGTTCTAGCTCCATGGAATTGCTTTTGAATTGGATTCAGGCAGTTTGTGACAATTATGATTGTGCAGTTGACAATTTCCATTCCCTTGTTGATGGCAAAGCTGTCTGGTGCTTACTTGATTATTACTTCCAGAAAGAACTTCAAAATTCCTGTTCGTTGAAGGAAATTAGTACAAAAAGTGGCAAGGCATCAATTATGTCAGTTGACGAATTTTCAGATGCACTGTATAATTTTATACTATCCCAAAAGTTGACTACATTACTGGGGAACTTCCCAGAGGTACTTCAAATTAGTGAGCTACTTCAGTATAATGGTGCTTGCAGTGATCGAAGTGTGGTGATTTTGTTGGTTTTCCTGGCAAGCCAGTTATTTGTCAAGAAAAATTTGGATCACTTAAATTTCCATAAACTCTTGGGTTATGACTGCCAAAGTCCCAATCACAGACATTTGAGGATGCTACGGTGCCTTTCAAATTCTGAATCAATACAAAAGCCTGATGCTTCCGATGTGCATGACAATGAAGATGCTGCAAGAAAATTCAAGGCCATCCAAACTTGGTGGCAAGACATGGCTGAAAGAAATGGTCTCAACAAACCAGCTGTCTCTAATTTAAAGGGATCCAGAATCACTGAATGCAGCACCACCATTAGAAGAGAAAATGCTGCAAGAACAATACAACTGCATTTCAGAGGATTGGTTGCACGGTGCAAGTTTCTGAAGATGGTAAATGCTATTACCCTTTTGCAAACTGTTTTCAGAGCTTGGCTAAAAGTGAGGCAAAAGTCAGCCTGTGCAATATTATGTACTGTTCAAGTCTGTGACTCTTCATGTGAAATATTGAAGCAATCAGAAACATATAAGAGATATGCCATGCTTTTCATTTATAGATGTTCCTTTTTGAGGTTAAAGAGCTCAGCACAGATTATCCAGAAAGCAGTTAGGAGTTGGCTCTGTAGGAGGCATAAGCAAGAGTCTAGTACAAGTCCTGATCTTTTGATTTCAGATATGACAGTGGCTGCTAATAATGTTCAGAAATTTGTCCCTGGTAAGATGGTACGATCTAGATATATTCATAAGCCAGATCAGACAGAGAAAGCTTTATTTTCTTCCCAACAGAAAGTCAGTTTCCATCTTCAGACAAATGCAGCCATTATCATTCAGCTTGCTTGGAAAAAGTTCATGCGCTGCAAGTCTACTCAGAAGCAACACCTATTTGCTACTAAAATTCAACAAAATTTCCGTAGGTGGTTATTGAGAAAAAGGTTTTTAGATCAGATTCAGGCTGTCGTAAAGATTCAATCTTATTTTCGAATGTGGAGATGTGTAAATGCTTTTCAGCTCTTCAAGAATGAGTTTAAGGCAGCTGTTGTTATTCAATCTTGTTTACGGGGCTGGTTTGCTCGAAAGGATGCCGGTGCACGTAGGAATCACCTATTTGCAACTAAAATTCAAGTAAATTTCCGCAAGTGGTTGTTGAGAAAAAGTTTTTTAAATCAGATTCAAGCTGTCATAAAAATTCAATCTTATTTTCGGATGTGGAGATGTGTAAATGCTTTCCAGAACCTCAAAATTGAGTTTAAATCAGCTGTTGTCATTCAGTCTTGTTTACGGGGCTGGTTTGCCCGAAAGAAGGCTTGTGCGCATAGGAATGACATAGTTGAGATTCAAAGGCATTGCCGTGGTTGGCTTGTAAAGCGGGACTTCTTGTTCCAAAGAGACGCTGTAGTAAAGATCCAGTGTGTCATTCGAAGCTTGAAGTGCCAAAAGGCTCTCAATTGTCAGAAAGATGCTGCTTTGGAGATCCAGCGCTTTATAAGGGGGCATTTAACTCGGAATCAACTATTAGGCAGTGCTTCCAAGCTACGCACAGTTATTCCTATTAGGTGCAGCTCAGGATCATTTGGCTTTTGTAGTTTTCAATTGGAACTGTTCTTGTTTTTGGTTGTGAAATTGCAACGATGGTGGAAGAGTCTCGTGTTGCTTAAGTTAATGAATAAATCGGCCATCATTATTCAGTCATGTACCCGTGGGTGGATAGCCAGGCGAAATGCTACTATTTATAGACGCCATGTTGTCATCCAAGAAGATGCTGCGTTGGTGATTCAACGCTACATTAGGGGACATTTAACTCGACTTCGGATACTAGGTGGTGCTGTCATTCCTGTTGGCTGCATATCAGGCCCAGTTGGCTGTCGTAGTTTTCCACTAGATCTATTTTTGCTTTCAGTTGTGAAATTGCAACGATGGTGGAAGGGTCTCTTGTTACAGAAATCGATGACAAAGTCTGCTATTGTTATTCAGTCTTGTACTCGTGGGTGGATAGCCAGGCGAAAGGCTACTATTCAGAGACATCATATTATTGTCATCCAATCCCACTGGAAAGGTTACCATGCACGTAAAGTTTCGAAGGAACAGTTATTGGATTTGCGCTTGAGAATGCAAAAGTCTGCCAGAAACGTAGATGACAGCAAGCGTATCATAAACAGACTCTTGGCAGCGCTTTCAGAGCTACTCAATATGAAGAGTCTTAGTAACATCCTTCATACTTGTTCCATATTGGACATGGCTACAGGGCATTCTCAGAAATGTTGTGAAGAACTTGTGGCTGCAGGGGCTATTGATACTTTGCTGCGGCTGATTCAAACGGTCAGCCGTAGTATACCTGATCAGGAGGTTCTAAAGCATGCTTTATCAACTCTCCGAAATCTTGCCCGCTATCCACATCTTCTGCAAGTGTTGATCCAAAGTCGTAGTTCTGTACAGATAATTGTCTTGGAGTTATTGAGGAATAAAAACGAGGGCTACTTCGTTGCTTCTGAACTTTTGAAGAAGATATGTTCAACTGGTATAGGCGTTGAGGCGATTCTGAAATCCCCTGCTCTGCTAAAACGACTGCACGGTCTTGTTGAGGACCATAAACGGAAGGGAATTTACGAGAAAAGAAATCCTAGGGCTCCTAACCTGGTTATCAAAGACAACAGAGAGAGAAGATTGAAAGAGGCTGCTGAGATTGTGAAGCTGATAAGAAGCGCATGA 4041 0.4044 MSLYFSLAACKEIFLQMNRVAKTIDEGRLNMKAHCPIVTDVGLKDKATRILMCYNSTWLRIGLFVIFGGDSLVLNGDVDSDHDAVFLRMVVDKLFFSHEGLAKEYAYNKMVEGVYRTGYYENLGNVILKRILLLVLVLDKAKCQSYLPLEYGIDGLDGGSPLLFKPESWIKSSSQLIHEFLSSDVMHGEGNLLTHLVILGYKVSHQQEPLVEYDFRIRDLFVDLQDGLKLCRAVQLLQHNSSILMKIIVPSDTPKKKLSNCSLALQYIRQAGGSLLDEDGMMIVADDIANGDKELTLSLLWNMFVHLQLPLLVDKTSLEGEISKIRGGTGLVNNASSSSMELLLNWIQAVCDNYDCAVDNFHSLVDGKAVWCLLDYYFQKELQNSCSLKEISTKSGKASIMSVDEFSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACSDRSVVILLVFLASQLFVKKNLDHLNFHKLLGYDCQSPNHRHLRMLRCLSNSESIQKPDASDVHDNEDAARKFKAIQTWWQDMAERNGLNKPAVSNLKGSRITECSTTIRRENAARTIQLHFRGLVARCKFLKMVNAITLLQTVFRAWLKVRQKSACAILCTVQVCDSSCEILKQSETYKRYAMLFIYRCSFLRLKSSAQIIQKAVRSWLCRRHKQESSTSPDLLISDMTVAANNVQKFVPGKMVRSRYIHKPDQTEKALFSSQQKVSFHLQTNAAIIIQLAWKKFMRCKSTQKQHLFATKIQQNFRRWLLRKRFLDQIQAVVKIQSYFRMWRCVNAFQLFKNEFKAAVVIQSCLRGWFARKDAGARRNHLFATKIQVNFRKWLLRKSFLNQIQAVIKIQSYFRMWRCVNAFQNLKIEFKSAVVIQSCLRGWFARKKACAHRNDIVEIQRHCRGWLVKRDFLFQRDAVVKIQCVIRSLKCQKALNCQKDAALEIQRFIRGHLTRNQLLGSASKLRTVIPIRCSSGSFGFCSFQLELFLFLVVKLQRWWKSLVLLKLMNKSAIIIQSCTRGWIARRNATIYRRHVVIQEDAALVIQRYIRGHLTRLRILGGAVIPVGCISGPVGCRSFPLDLFLLSVVKLQRWWKGLLLQKSMTKSAIVIQSCTRGWIARRKATIQRHHIIVIQSHWKGYHARKVSKEQLLDLRLRMQKSARNVDDSKRIINRLLAALSELLNMKSLSNILHTCSILDMATGHSQKCCEELVAAGAIDTLLRLIQTVSRSIPDQEVLKHALSTLRNLARYPHLLQVLIQSRSSVQIIVLELLRNKNEGYFVASELLKKICSTGIGVEAILKSPALLKRLHGLVEDHKRKGIYEKRNPRAPNLVIKDNRERRLKEAAEIVKLIRSA* 1347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00149 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 710 805 IPR027417 -
Lapu3g00149 1346 ProSiteProfiles Calponin homology (CH) domain profile. 186 308 IPR001715 GO:0005515
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 929 958 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 859 881 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 759 781 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 575 598 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 998 1020 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 785 807 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 552 574 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 905 927 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 928 950 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 833 855 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 1028 1050 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 670 692 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 736 758 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 882 904 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 810 832 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 1116 1138 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 636 658 IPR000048 GO:0005515
Lapu3g00149 1346 SMART iq_5 1093 1115 IPR000048 GO:0005515
Lapu3g00149 1346 SUPERFAMILY ARM repeat 1163 1307 IPR016024 -
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 815 840 IPR000048 GO:0005515
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 883 912 IPR000048 GO:0005515
Lapu3g00149 1346 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1206 1239 IPR000225 GO:0005515
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 860 889 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam Calponin homology (CH) domain 216 306 IPR001715 GO:0005515
Lapu3g00149 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1076 1139 IPR027417 -
Lapu3g00149 1346 Gene3D - 1149 1345 IPR011989 -
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 786 815 IPR000048 GO:0005515
Lapu3g00149 1346 Gene3D - 335 459 IPR036872 -
Lapu3g00149 1346 Gene3D - 996 1051 - -
Lapu3g00149 1346 Gene3D - 907 957 - -
Lapu3g00149 1346 Gene3D - 861 906 - -
Lapu3g00149 1346 Gene3D - 808 860 - -
Lapu3g00149 1346 Gene3D - 734 787 - -
Lapu3g00149 1346 Gene3D - 1093 1142 - -
Lapu3g00149 1346 Gene3D - 552 600 - -
Lapu3g00149 1346 SMART arm_5 1195 1240 IPR000225 GO:0005515
Lapu3g00149 1346 Pfam Armadillo/beta-catenin-like repeat 1195 1240 IPR000225 GO:0005515
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 999 1026 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 762 780 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 639 656 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 788 805 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 836 854 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 741 757 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 1120 1135 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 1031 1048 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 862 879 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 1095 1113 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 887 903 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 931 949 IPR000048 GO:0005515
Lapu3g00149 1346 Pfam IQ calmodulin-binding motif 1001 1018 IPR000048 GO:0005515
Lapu3g00149 1346 CDD CH_ASPM_rpt1 192 303 - -
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 1117 1145 IPR000048 GO:0005515
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 1029 1053 IPR000048 GO:0005515
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 834 863 IPR000048 GO:0005515
Lapu3g00149 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 987 1048 IPR027417 -
Lapu3g00149 1346 Gene3D - 201 309 IPR036872 -
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 737 766 IPR000048 GO:0005515
Lapu3g00149 1346 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 863 937 IPR027417 -
Lapu3g00149 1346 PANTHER UNCHARACTERIZED 781 901 - -
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 1094 1121 IPR000048 GO:0005515
Lapu3g00149 1346 SUPERFAMILY Calponin-homology domain, CH-domain 133 385 IPR036872 -
Lapu3g00149 1346 ProSiteProfiles IQ motif profile. 553 581 IPR000048 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00149 788 935 Myosins gene family AT5G43900 30.921 4.06e-08 56.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00149 K16743 - gmx:100817636 2265.73