Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00120 ATGCCTTCCATTGCATTTCTACTACTTTGGTGCGTGGCACTGTTCACTGCCACTGCTTTATCTTTACTTTACGTCCTCAAGTGCATCTTTCACTTTGATGTGGTGAAGGAGGAGTTTTCGCACCATATTGGAGTGAACTGCATGTATGCTCCTTGGATTTCTTGGCTTCTCATGCTTCAATCAGCACCCATGATTGTTCATGCAGCTTGTTATTACGAAGTTCTTTGCTTGGCTTTTTCCTTTGTAATACTGCTGATTGATATTAAACTTTATGGACAGTGGTTCACAACTAAAAGGCGGTTTCTGTCGATTGTGGCAAACCCTACTAGCCAGGTTTCGGTTATAGGGAACTTAGTGGCTGCTCAAGTTATTGCAGAAATTGGTTGGAAAGAGAGTGCAGTTTTAATGTTCTCACTCGGATTGGTATTCTATTTAGTTATATTTATAACTCTATATCAGCGTCAGACAAGTGGAAACCAGTTTCCAACAGTGCTAAGGCCAGCTTACTTCTTGTTTTTTGCTGCACCAAGCATGGCAAGTTTAGCATGGAAATCCATCTTAGGTGCTTTTGTCACCCCATCAAAGATGCTTCTCTTTCTGTCTTTATTCCTTTTAATGTCTCAGGCTTGCAGACCAGCCATGTTCAAGAAATCGATGAAGAGGTTAAATGTTACATGGTGGCTGTACTCATTCCCTTTAACCTTCCTTGGTCTAGCTTGTGCGGAATATGCTCAAGATGTGAAAAGTGGCATGGCCTCATGGTTAATGCTGGTTATATGTATGGTCTCGGTGCTGGTTTTCATTGCTTTGATGATCATCACTGTACTCAAAATTGAGACGCTACTCAACAAAAATGCTCCCATTACTAGTTGA 873 0.4124 MPSIAFLLLWCVALFTATALSLLYVLKCIFHFDVVKEEFSHHIGVNCMYAPWISWLLMLQSAPMIVHAACYYEVLCLAFSFVILLIDIKLYGQWFTTKRRFLSIVANPTSQVSVIGNLVAAQVIAEIGWKESAVLMFSLGLVFYLVIFITLYQRQTSGNQFPTVLRPAYFLFFAAPSMASLAWKSILGAFVTPSKMLLFLSLFLLMSQACRPAMFKKSMKRLNVTWWLYSFPLTFLGLACAEYAQDVKSGMASWLMLVICMVSVLVFIALMIITVLKIETLLNKNAPITS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00120 290 Pfam Voltage-dependent anion channel 5 275 IPR004695 GO:0016020|GO:0055085
Lapu3g00120 290 Gene3D - 1 282 IPR038665 -
Lapu3g00120 290 FunFam S-type anion channel SLAH1 1 282 - -
Lapu3g00120 290 PANTHER S-TYPE ANION CHANNEL SLAH3 3 283 IPR030183 GO:0006873|GO:0008308|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00120 Lapu-Chr3 1463704 1464920 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00120 K26672 - gmx:100779095 520.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu3g00120 3 1463704 1464920 Lapu3g00120 3 1463704 1464920 ECH
Lapu6g01609 6 15969105 15970469 Lapu3g00120 3 1463704 1464920 ECH
Lapu5g00622 5 5780621 5781793 Lapu3g00120 3 1463704 1464920 ECH
Lapu11g00249 11 5447598 5448665 Lapu3g00120 3 1463704 1464920 ECH