Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00115 ATGATTTCTTCCAGGAACTTTGGTATCAGAAAGCGAGAAACGATCGGCCACATAAAGTCAATATTAGAGGAAGAGTGTCCGGGACAGGTGTCTTGCGCTGATATCATTGTATTAGCTGCCAAGGAGTCAGTGTCTATCTCTGGAGGACCCCGTATTCAGATCCCACTTGGAAGGAAAGACTCCACAACTTGTAGTCTACAGGAGGCCGATGCTAAGCTTCCTTCACCAGCAATAACGGTGGATGAATTTATATCCGATTTCAAGTCCAAAGGAATAAACATCGAAGAGTCTGTTTCGCTTTTAGGTGCACACACACTAGGGGTTGGACACTGCCTCAACATTGTTGGTAGATTGTATGATCCACGTCTAGGGGACCAGATGAATTTTGAGTTTGAAGCCTCACTAAAACTAGCATGTCCAAATGAGACTCCTCTCACAAACCTCACATCTGTGCCTAATGACATGACTCCCGTTATATTTGACAACCAGTATTACCGAGACATTATGATGGGGAGAGGCTTGTTTGGTATTGACTCCAGCATTTCTAGAGATCCGCGAACAGCACCCTTTGTCATGCGGTTTGCTATGGATCAGAACTACTTCTTCAGGGCTTTCTCATCTGCATTTGTTAAACTTTCTTCTACCAATGTTCTCACAAATGTGCAGGGTGATGTTCGAAGGCAATGCAACCAGGTAAACTAA 702 0.4416 MISSRNFGIRKRETIGHIKSILEEECPGQVSCADIIVLAAKESVSISGGPRIQIPLGRKDSTTCSLQEADAKLPSPAITVDEFISDFKSKGINIEESVSLLGAHTLGVGHCLNIVGRLYDPRLGDQMNFEFEASLKLACPNETPLTNLTSVPNDMTPVIFDNQYYRDIMMGRGLFGIDSSISRDPRTAPFVMRFAMDQNYFFRAFSSAFVKLSSTNVLTNVQGDVRRQCNQVN* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00115 233 Gene3D Peroxidase, domain 2 74 212 - -
Lapu3g00115 233 PRINTS Haem peroxidase superfamily signature 48 60 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Haem peroxidase superfamily signature 153 168 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Haem peroxidase superfamily signature 30 47 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Haem peroxidase superfamily signature 96 111 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Plant peroxidase signature 167 184 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Plant peroxidase signature 48 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Plant peroxidase signature 95 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Plant peroxidase signature 10 23 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Plant peroxidase signature 29 39 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Plant peroxidase signature 207 220 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PRINTS Plant peroxidase signature 151 166 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 FunFam Peroxidase 74 212 - -
Lapu3g00115 233 ProSiteProfiles Plant heme peroxidase family profile. 1 233 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 SUPERFAMILY Heme-dependent peroxidases 5 233 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 PANTHER - 13 233 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 Pfam Peroxidase 5 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lapu3g00115 233 Gene3D - 6 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00115 Lapu-Chr3 1433898 1435443 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00115 3 233 Peroxidase AT3G17070 51.695 1.18e-79 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00115 K00430 - gmx:100797313 418.313