Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00110 ATGGCCAGAGTGATTGCTGCTTCCATAGCTTTGCCATTTGTAGCAGCCATTCTGATTTCCATGTTGTTGGCTGCTTTGACTTCATGCCTAATTCAAGAAGAGCATTCTATATACTTGGTCTTGATGGAAGCAGATGCTCTTGCTTTTCATCCTCAAGCTTCAATTCACGAACTTTCTTCAACTCTGCACCCCAACAGCGAAGTTTCAAAGGCACATGCAAAGAACTTAATATCATCTCACGACCAATTTCTGCAAAGCACCTTGGACACAGGAAGCTACAATAAACTCCATAGTTACAAACACATTATCAATGGTTTTTCTGTCCTCACAACCCCTTCCCAGGCTGAAAGACTAAGAGGTAGCGCGGGAGTTAAGTTGGTAGAGAAAGACAGAGGAGTGAAAATGATGACAACATACACACCTGAGTTTCTAAATTTACCGAAGGGATTATGGGCGCAGGAAGGAGGAGACAAAAATGCAGGTGATGGAGTTGTGATTGGTTTTGTGGATAGTGGCATCAACCCTTTTCATCCCAGCTTTGCTTACGATCCCATGAAACCTTTCACAACAAATCTCTCTCGTTTTTCTGGTGCCTGTATGACGGGTCCTCTCTTCCCTTCCAGTTCTTGCAATGGAAAGATAGTATCCGCCAGGTACTTCTCTGCTGGGGCTGAAGCTGCTGCTACCCTCGATGCTTCCAAGGATTTTCTTTCACCGTATGACGCAGATGGACATGGCAGTCATGTAGCATCTATTGCTGCTGGAAATGCTGGTGTTCCTGTTGTGGTGAACAGTTTTTTCTATGGGAAAGCTAGTGGAATGGCACCACGTGCAAGGATTGCTGTTTATAAGGCTATGTATCCCTCCGTGGGAACTCTAGCAGATGTTATTGCTGCGATCGATCAAGCTGTCCTGGATGGGGTGGATATCTTATCGCTTTCAGTTGGACCAAGTAAACCATCAGAAGACACGTTAAACTTCTTAAACATATTTGATATATCTTTGTTGTTCGCACGAAAAGCAGGAGTTTTCGTGGTGCAGGCTGCAGGGAACAACGGTCCCGCATCTTCAAGTGTAGTGTCATTCAGTCCCTGGAGTGTCGGTGTTGCCGCTAGCACCACAAACAGAAGGTACCCTTCTTCACTTCTTCTTGGAAATGGCTCAATACTCAGTGGCGTGGGACTATCAGGACCAAGTTTTGGAAATGGATCAGTTTGGCATAAGCTTGTTTTAGCTAAGGATGCAGTCAAAATAAAAGGAACAAGTCCAAAGACTCAGGAGTACATAGAGGAGTGCCAGCATCCAGAAGATTTGGACCCTAAGAGAGTGTCGGGAAGTATCATTATCTGCACCTTCTCAGCTGGCTTCTATAATGGCACTTCAACTCTTGATGCTATTATTGACACCGTGAAGGCTCTAGGAATGGAGGGCTTTGTTTTAGTTGCGAACCCAAGCTATGGTGATTATATCGGAGAGCCAATGACTTTTTCTGTTTCTGGTATTTTGATCCCTCGTGTAGAGGATGCCAAGGTTATATTACAGTACTGTGAAGAGCACACAAAGAGGGATGATAAAGGAACTGCCACAGAATTTGGTGCTTTGGGAGCTGTGGCAGAAGGAAGACTTGCCTCTTTTACAGGGAGATCGCCGATGGTCAGTAGATTTTCTTCAAGGGGTCCAGATATCATTGACTTCAACAAAAGTCTTGCAGATGTACTTAAACCTGATATTCTTGCTCCAGGGCATCAAATATGGGCAGCCTGGAGCCCCTTCAGTGCCTCAGAACCTATGCTCAAAGGGAACAGTTTTGCATTATTATCTGGTACCAGCATGTCCACACCTCATGTGGCGGGAATAGCAGCACTGATCAAGCAATACAATCCATCATGGACTCCATCCATGATAGCATCTGCGATCTCTACAACAAGCTCAAAGTATGATAATCTTGGAGAGCCTATAATGGCAGAAGGCTATGAGGTCAACAGCTTGCTTCCCGCCACTCCTTTTGAATATGGGTCAGGCTTTGTGAACCCCAATCGTGCCATTGATCCTGGTTTGGTACTGTCATCAGAATATGTAGACTTTATCAGCTTCTTGTGCTCTTTGCCAAGCATAGACACGAATGCAATTGTTGCAGCTACTGGAGAGCAATGCAATCACCCATTTGCCAATCCTTTCAGTCTAAACCTTCCTTCAGTTACGCTATCTTCACTAAGAGGATCAGTTTCTGTCCGAAGAACTTTTACGAATGTGGGGAACACCACAGAGACATACTTGGCCTCTGTTCTCCCTCCAAATGGAACTAAAGTCTACCTGTGTCCAACTTGGTTCACCTTAACTCCACAAGGAACGCAAGATTTGGATATACAATTCAGTGTCGTCCAACCAATGCAGAATTTTACCTTTGGTGAAATTGTCCTGACAGGAAATTTAAACCACATTGTACGAATAACATTGTCAGTCTTGGCGATTTCAGTCTAA 2481 0.445 MARVIAASIALPFVAAILISMLLAALTSCLIQEEHSIYLVLMEADALAFHPQASIHELSSTLHPNSEVSKAHAKNLISSHDQFLQSTLDTGSYNKLHSYKHIINGFSVLTTPSQAERLRGSAGVKLVEKDRGVKMMTTYTPEFLNLPKGLWAQEGGDKNAGDGVVIGFVDSGINPFHPSFAYDPMKPFTTNLSRFSGACMTGPLFPSSSCNGKIVSARYFSAGAEAAATLDASKDFLSPYDADGHGSHVASIAAGNAGVPVVVNSFFYGKASGMAPRARIAVYKAMYPSVGTLADVIAAIDQAVLDGVDILSLSVGPSKPSEDTLNFLNIFDISLLFARKAGVFVVQAAGNNGPASSSVVSFSPWSVGVAASTTNRRYPSSLLLGNGSILSGVGLSGPSFGNGSVWHKLVLAKDAVKIKGTSPKTQEYIEECQHPEDLDPKRVSGSIIICTFSAGFYNGTSTLDAIIDTVKALGMEGFVLVANPSYGDYIGEPMTFSVSGILIPRVEDAKVILQYCEEHTKRDDKGTATEFGALGAVAEGRLASFTGRSPMVSRFSSRGPDIIDFNKSLADVLKPDILAPGHQIWAAWSPFSASEPMLKGNSFALLSGTSMSTPHVAGIAALIKQYNPSWTPSMIASAISTTSSKYDNLGEPIMAEGYEVNSLLPATPFEYGSGFVNPNRAIDPGLVLSSEYVDFISFLCSLPSIDTNAIVAATGEQCNHPFANPFSLNLPSVTLSSLRGSVSVRRTFTNVGNTTETYLASVLPPNGTKVYLCPTWFTLTPQGTQDLDIQFSVVQPMQNFTFGEIVLTGNLNHIVRITLSVLAISV* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00110 826 ProSiteProfiles Serine proteases, subtilase domain profile. 138 682 - -
Lapu3g00110 826 Pfam Fibronectin type-III domain 728 821 IPR041469 -
Lapu3g00110 826 Gene3D - 699 823 - -
Lapu3g00110 826 Gene3D - 375 545 - -
Lapu3g00110 826 Gene3D Peptidase S8/S53 domain 163 695 IPR036852 GO:0004252|GO:0006508
Lapu3g00110 826 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 166 177 IPR023827 -
Lapu3g00110 826 SUPERFAMILY Subtilisin-like 135 686 IPR036852 GO:0004252|GO:0006508
Lapu3g00110 826 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 86 819 IPR045051 -
Lapu3g00110 826 PRINTS Subtilisin serine protease family (S8) signature 161 180 IPR015500 -
Lapu3g00110 826 PRINTS Subtilisin serine protease family (S8) signature 241 254 IPR015500 -
Lapu3g00110 826 PRINTS Subtilisin serine protease family (S8) signature 607 623 IPR015500 -
Lapu3g00110 826 CDD PA_subtilisin_like 381 515 - -
Lapu3g00110 826 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 135 IPR037045 -
Lapu3g00110 826 ProSitePatterns Serine proteases, subtilase family, serine active site. 608 618 IPR023828 -
Lapu3g00110 826 Pfam Peptidase inhibitor I9 70 135 IPR010259 -
Lapu3g00110 826 ProSitePatterns Serine proteases, subtilase family, histidine active site. 245 255 IPR022398 -
Lapu3g00110 826 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 29 - -
Lapu3g00110 826 Pfam Subtilase family 161 646 IPR000209 GO:0006508|GO:0008236
Lapu3g00110 826 CDD Peptidases_S8_3 133 644 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00110 Lapu-Chr3 1385478 1391100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00110 37 824 Subtilisin-like Serine Gene Family AT1G62340 60.503 0.0 968
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00110 - - gmx:100798915 1257.28