Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00106 ATGAGAGCTTCAAAGCAGCAGAAGCAGAATCAGCTCCAACAAAGAGGATGCAAGGCCTTGTGTTGCAGTTGCAGGTTCAGTGTTTCTTCTTTTGAAGAAGCAGAAAGCTCAGCCTCTGATAGGTTCCCTTCTGTTTCAAGCCTTGCACATGCCATGGTGCAAGAGAGACTTGACCAAATGATTAGAGAAAGGACGGAAGCTAGTCATGTAGAGAGAAGAAGACGGCAGAGCAGAGAAGGGACCAAGTTTGTTGTAATGGTAGCAATGGAGAAGAGCTCTTATGATCCTAGAGAAGATTTTAGAGAGTCCATGATGCAGATGATAACTGCCAACCACCTTCAAGATGCCAAAGATCTTCGTAGTCTGTTGAATTATTATATCTCCATGAACTCTAATGAGTACCACAGTCTTATACTTGAGGTTTTTCATGAGGTTTGTACTAATTTGTTCTTATCATGTAAATGTCATTGGTAA 474 0.4156 MRASKQQKQNQLQQRGCKALCCSCRFSVSSFEEAESSASDRFPSVSSLAHAMVQERLDQMIRERTEASHVERRRRQSREGTKFVVMVAMEKSSYDPREDFRESMMQMITANHLQDAKDLRSLLNYYISMNSNEYHSLILEVFHEVCTNLFLSCKCHW* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00106 157 NCBIfam uncharacterized plant-specific domain TIGR01568 87 150 IPR006458 -
Lapu3g00106 157 ProSiteProfiles OVATE domain profile. 89 148 IPR006458 -
Lapu3g00106 157 Pfam Transcriptional repressor, ovate 93 150 IPR006458 -
Lapu3g00106 157 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 13 150 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00106 Lapu-Chr3 1332732 1333205 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu3g00106 Ovate 9.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00106 - - var:108330150 271.937