Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu3g00077 ATGGAATTCCAACCTTCTTTCATGGTTATGGCCTTATTCCTCTTGTTACTGTTTTGGCTTGCAAGAATTTACAAGCAGAAAATGAAAGTGAGGAGTGCGGTTCATAAGCTTCCCCCGGGTCCATGGAAGCTTCCTCTAATAGGAAACCTTCATCAACTGGCAGCAGCAGGCACACTTCCACACCACACCCTTCAAAACCTATCACACAAATATGGACCTTTGATGCACCTTCAACTGGGTGAAATATCTGCCGTGGTTGTGTCATCCACTGAAATGGCCAAGGAGATAATGAAGACACATGATCTTAATTTTGTGCAGAGGCCAGAACTCCTTTGTCCTAAAATCCTGGCCTATGGATCAACCGATATTGCTTTCGCTCCATACGGTGATTACTGGAGGCATATGAGGAAAATATGTACACTGGAGCTTCTTAGTGCCAAAAGGGTTCAGTCTTTCTCCTTGATTCGCGAAGATGAGGTAACTAAACTCATAGGATCCATTCAAGCGTGTGCATGTACAGGTTCACAAGTCAATGTTTCTAAAAGCGTTTCCTCTTTGGTAAGTACCATTGTGTCAAGGGCAGCCTTGGGAAAAAAATCAGAGCATGAAGACCAACTTTTGTGTTTGCTCAAGAAAGGAGTGGAACTCGCGGGAGGGTTTGATCTTGCTGATTTGTTCCCTTCAGTGAAACCTATCCATCTTATAACTGGGATAAAAAGTAAGTTGGAGAAAATGCATGAAGAGCTGGACAAGATTCTAGACAACATTATCAGCGAGCATGGATCGAAGCATCGAAAGGGAGCAGCAGAAGAGAATATGGTTGATGTTCTTTTGCGCGTACAACAAAGTGCCACCCTCGACACCCCTGTAACAATCAACAACATCAAAGCCATCATATGGGCGGACATATTTGGGGCAGGGACGGATACCTCAGCAACAGTGCTGGAGTGGGCTATGTCAGAGTTGCTGAAAAACCCACGAGTGATGAAAAAGGCACAGGCTGAAATAAGAGAAGCTTTGAAGGGAAAGAAAAGAATTGGTGAGAGTGAGGTGCAGGAACTTAGCTACTTGAAGTTGGTGATCAAAGAAACATTGAGGTTGCATCCACCTGCTCCCTTGTTGCTGCCAAGAGAATGCAGGGAGCCTTGCATGATAGGTGGATATGAAATACCTGTGAAGACGAAAGTGATGGTAAATGCATGGGCCCTTGGAAGAGATCCAAAGCATTGGTATGATGCAGAGAAGTTCATACCTGAGAGGTTTGATGGCACAGATATAGATTTTAAGGGGAATAATTTTGAATACATTCCCTTTGGGGCAGGGAGGAGAATGTGTCCTGGCATTTTACTTGGCTTGGCTAATGTTGAACTTCCTCTGGCTGCGTTGATCTATCACTTTGACTGGGAACTCCCCAATGGAATCAAACCAGACACCTTTGATATGACTGAAACCTTTGGAGCTACAGTGGCAAGGAAAAACAACCTTTATTTGCTACCAACTCCATATGACTATTCCCTTCATCCCCATGTCATTGCCAATTAA 1542 0.441 MEFQPSFMVMALFLLLLFWLARIYKQKMKVRSAVHKLPPGPWKLPLIGNLHQLAAAGTLPHHTLQNLSHKYGPLMHLQLGEISAVVVSSTEMAKEIMKTHDLNFVQRPELLCPKILAYGSTDIAFAPYGDYWRHMRKICTLELLSAKRVQSFSLIREDEVTKLIGSIQACACTGSQVNVSKSVSSLVSTIVSRAALGKKSEHEDQLLCLLKKGVELAGGFDLADLFPSVKPIHLITGIKSKLEKMHEELDKILDNIISEHGSKHRKGAAEENMVDVLLRVQQSATLDTPVTINNIKAIIWADIFGAGTDTSATVLEWAMSELLKNPRVMKKAQAEIREALKGKKRIGESEVQELSYLKLVIKETLRLHPPAPLLLPRECREPCMIGGYEIPVKTKVMVNAWALGRDPKHWYDAEKFIPERFDGTDIDFKGNNFEYIPFGAGRRMCPGILLGLANVELPLAALIYHFDWELPNGIKPDTFDMTETFGATVARKNNLYLLPTPYDYSLHPHVIAN* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu3g00077 513 PANTHER OS08G0105600 PROTEIN 62 503 - -
Lapu3g00077 513 SUPERFAMILY Cytochrome P450 38 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 CDD CYP71-like 70 495 - -
Lapu3g00077 513 Pfam Cytochrome P450 38 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 FunFam Cytochrome P450 71D8 30 499 - -
Lapu3g00077 513 PRINTS E-class P450 group I signature 92 113 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS E-class P450 group I signature 68 87 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 Gene3D Cytochrome P450 22 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu3g00077 513 Coils Coil 239 259 - -
Lapu3g00077 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu3g00077 Lapu-Chr3 1082792 1084466 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu3g00077 29 502 Cytochrome P450 AT3G26300 45.322 1.24e-146 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu3g00077 - K15472 gmx:100794503 837.41